Natronomonas moolapensis: Nmlp_1532
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Entry
Nmlp_1532 CDS
T02478
Symbol
rad3a
Name
(GenBank) DNA repair helicase Rad3
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
nmo
Natronomonas moolapensis
Pathway
nmo03022
Basal transcription factors
nmo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nmo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Nmlp_1532 (rad3a)
09124 Replication and repair
03420 Nucleotide excision repair
Nmlp_1532 (rad3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmo03021
]
Nmlp_1532 (rad3a)
03400 DNA repair and recombination proteins [BR:
nmo03400
]
Nmlp_1532 (rad3a)
Enzymes [BR:
nmo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
Nmlp_1532 (rad3a)
Transcription machinery [BR:
nmo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
Nmlp_1532 (rad3a)
DNA repair and recombination proteins [BR:
nmo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
Nmlp_1532 (rad3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
DEAD
AAA_22
nSTAND3
PhoH
AAA_19
Motif
Other DBs
NCBI-ProteinID:
CCQ35733
UniProt:
M1XKE2
LinkDB
All DBs
Position
complement(518264..520699)
Genome browser
AA seq
811 aa
AA seq
DB search
MVDTSLSEAESVPFVSPDPEWRTIFGHDEPYDDQVDGIETAIDTAVESGFLALEGACGTG
KTMLALTAGLSLVRDPDSSFERVFVLTSVKQQLKQFEADLRTINANLPDEWRPVSAMTLV
GKADVCPYNVAGAGGIDDANVYERCEGLRERTRGLADGETTAASLAGAARSQQVGLADSG
DGADFLEAAGEPTPYPEETPDSEGGTEYCPFYAGFLEDLPEEGDPIEAVPFDPTDRGLIG
TDELIRLSAGHGSCPHSVMGALLPNVEVLVGNYYHAFDPTTVESFTGGLIDEKTFVVCDE
AHMLEPRVRDLVGDGVSDRALSDAETELSRVIEPVAAVEEAGAGTQYGDEAKERAETIRE
ALSESDVTVGELRDTRRFLTALLDRLDDRVTGHLDEGRPGWEERLPDLEDREIPLRDPER
PGTDELTRWAGHNGFDARVWDRAESVCAVAGRVLDTLEEEDKRRAAPPVGRTLTQWHAAD
HTDYFREIELERTWDDTRPTGSWKRAYTATYSLHNCLPAGAIGDRLDEFGGGVLMSATLE
PLEVFTEVTGLEHLESETGRPVVERTYGLEFPEENRASFALAAPKFTYENRGDVDETTPT
RRAHARAIRQVAASPGNVLVGMPSYREAEWAAETLSELDKPVLVDEATDDTATERLKREF
FEGEPKVLVTSLRGTLTEGVDYRGDRLSAAIVCGVPIINTASPRTRAVRTAYDRAFGGTS
GRSPDGASGASASDAGFKYALAVPAVRKARQAVGRVIRGPGERGIRVLCDERYAKESWNS
VRGLLGEAEREEFRSVGTEMLEYALEGFRER
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
gtggtcgatacgtctttaagtgaagccgagtcagttccgttcgtgtccccggaccccgag
tggcggacgatcttcggccacgacgagccctacgacgaccaagtcgacggcatcgaaacc
gcgatcgacaccgccgtcgagtcgggctttctggccctggagggcgcctgcggcaccggc
aagacgatgctcgcgctcaccgcggggctctcgttggttagagaccccgactcgtcgttc
gagcgcgtcttcgtgctgacgagcgtcaaacagcaactcaaacagttcgaggccgacctc
cggacgatcaacgcgaacctccccgacgagtggcggccggtctcggcgatgacgctcgtg
gggaaagccgacgtctgcccgtacaacgtcgcgggggcgggcggcatcgacgacgcgaac
gtctacgagcgctgtgagggcctccgcgagcggacccgggggctggccgacggcgagacg
accgccgcctcgctcgcgggggccgcgaggagccagcaggtcgggctggccgattcgggc
gacggggccgacttcctcgaggccgccggcgagccgacgccgtaccccgaggaaaccccc
gattccgaaggaggaaccgagtactgcccgttctatgcgggctttctcgaggacctgccc
gaggagggcgacccgatcgaggccgtccccttcgacccgaccgaccgcggtctcatcggc
accgacgagttgatccggctctcggccggccacggcagttgcccgcattcggtgatgggc
gcgcttttgccgaacgtcgaagtgctcgtcggcaactactatcacgccttcgatccgacg
acggtcgaatccttcaccggcggcctcatcgacgagaagacgttcgtcgtctgcgatgag
gcacatatgctcgaaccgcgggtcagagacctcgtcggcgacggcgtctccgaccgggcg
ctctcggacgccgaaaccgagctctcccgcgtgatcgagccggtagcggcggtcgaggag
gccggcgccggaacgcagtacggcgacgaggcaaaggaaagggccgaaacgatccgggag
gcgctttcggaatcggacgtgaccgtcggcgaactccgggacacgcggcggttcctgacg
gcgctgctcgatcggctcgacgaccgcgtaaccggccacctcgacgagggccgccccgga
tgggaagagcgcctccccgacctcgaggaccgcgagatcccgctccgtgatcccgagcgg
ccgggaacggacgaactgacgcggtgggccgggcacaacggcttcgacgcgcgggtctgg
gaccgcgccgagagcgtgtgtgcggtcgcggggcgggtcctcgacacgctcgaagaggag
gacaaacgccgcgccgcgccgccggtagggcggacgctcacgcagtggcacgccgcggat
cacaccgactacttccgggagatcgaactggaacggacctgggacgacacccgcccaacc
gggtcgtggaagcgggcctacaccgcgacctacagcctccacaactgcctgccggcgggg
gcgatcggcgatcggctcgacgagttcggcggcggggtgttgatgagcgcaactctcgag
cccctcgaggtattcaccgaggtgacagggctcgagcacctcgagtccgagaccggccgc
cccgtcgtcgagcggacctacggtctcgagtttcccgaggagaaccgcgcctccttcgcg
ctggccgccccgaagttcacctacgagaaccgcggcgacgtcgacgagacgacgccgacg
cggcgggcccacgcccgggcgatccgacaggtcgcggcgtcgccgggcaacgtgttggtc
gggatgccctcctaccgggaggccgagtgggccgccgagacgctctcggagctcgacaag
ccggtcttggtcgacgaggcgactgacgatacggcgaccgagcggctgaaacgcgagttc
ttcgagggggagccgaaggtgctggtgacgagcctccgcgggacgctcacggagggcgtc
gactaccgcggcgaccggctctcggccgcgatcgtctgcggcgtcccaatcatcaacacc
gccagcccccggacccgcgcggtccggaccgcctacgatcgggctttcgggggcacctcc
gggcggagcccggacggcgcctcgggcgcgtcggcgtccgacgccgggttcaagtacgct
ctggcggtgccggccgtccggaaggccagacaggccgtcggacgggtcatccgcggtccc
ggcgagcgcgggatccgggtgctctgtgacgagcgctacgcgaaggagtcctggaacagc
gtccgcgggttgctcggcgaggccgaacgcgaggagttccggtcggtcggcacggagatg
ctggagtacgccctcgaggggttccgagaacggtga
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