Natronomonas moolapensis: Nmlp_1960
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Entry
Nmlp_1960 CDS
T02478
Symbol
tfbA5
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
nmo
Natronomonas moolapensis
Pathway
nmo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nmo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Nmlp_1960 (tfbA5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmo03021
]
Nmlp_1960 (tfbA5)
Transcription machinery [BR:
nmo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Nmlp_1960 (tfbA5)
Prokaryotic type
Archaeal type
TFB
Nmlp_1960 (tfbA5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Zn_ribbon_tTFIIB
Cyclin_C
TrmB
DZR_2
DZR
Trm112p
HTH_24
Sigma70_r4
HTH_Tnp_ISL3
Zn_ribbon_3
YopD
Zn_ribbon_LysW
BRF2-like_C_cyclin_rpt
IBR_1
Cyclin_N
Cas12f1-like_TNB
DUF7129
Motif
Other DBs
NCBI-ProteinID:
CCQ36145
UniProt:
M1XQ14
LinkDB
All DBs
Position
914702..915676
Genome browser
AA seq
324 aa
AA seq
DB search
MSNTELRTHVEESRTDPTERTDSAEDTTTCPECDARLEADSEHGETVCTECGLVVEEDEI
DRGPEWRAFDSAEKDQKSRVGAPTTNMMHDKGLSTNIGWQDKDAYGRQLSTRQRQKMQRL
RTWNERFRTRDSKERNLKQALGEIERMASALGLPENVRETASVIYRRALDDNLLPGRSIE
GVSTAALYTAARQAGIPRSLDEIERVSRVDRMELTRTYRYIIRELNLEVKPADPESYIPR
FVSDLGLSDEVERRARELIEAARGDGLLSGKSPVGLAAAAVYAAALLCNEKVTQNDVSEV
ADISEVTIRNRYKELLEAGDVVTA
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacactgaactcagaacccacgtagaagagagccgaaccgacccgaccgaacga
accgacagcgccgaggacaccacgacctgcccggagtgtgacgcccgtctagaggccgat
tcggagcacggggagacggtctgtaccgaatgcgggctcgtcgtcgaagaggacgagatc
gaccgcgggccggagtggcgcgccttcgacagcgccgagaaggatcaaaagtcccgcgtc
ggcgcccccaccaccaacatgatgcacgacaaggggctctccaccaacatcggctggcag
gacaaagacgcctatggacggcagctatcgacccgtcagcgccagaagatgcagcggttg
cggacctggaacgagcgcttccgcacgcgggactccaaggagcgcaacctcaagcaagcc
ctcggcgaaatcgaacggatggcctccgcgctcggtctccccgaaaacgtccgcgaaacc
gcctccgtcatctaccgccgcgcgctcgacgacaacctcctccccggacgctccatcgaa
ggcgtctccaccgccgcgctgtacaccgccgccagacaggccggcatcccgcgcagcctc
gacgagatcgagcgcgtctcccgcgtggatcggatggagttgacccgcacgtaccgctac
atcatccgggagttgaacctcgaggtcaagccggcggacccggagagctacatcccgcgg
ttcgtcagcgacctcggtctctccgacgaggtcgaacgccgcgcgcgcgaactcatcgag
gccgcccgtggcgacgggctcctctccgggaagtcgccggtggggctggccgccgccgcg
gtgtatgccgccgcgttgctctgcaacgagaaggtcacacaaaacgacgtctcggaggtc
gcggacatctccgaggtcaccatccgcaaccggtataaagaactgctcgaggcgggcgac
gtcgtgacggcgtag
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