Natronomonas moolapensis: Nmlp_2391
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Entry
Nmlp_2391 CDS
T02478
Symbol
cdc48a
Name
(GenBank) AAA-type ATPase (CDC48 subfamily)
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nmo
Natronomonas moolapensis
Pathway
nmo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nmo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Nmlp_2391 (cdc48a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmo03019
]
Nmlp_2391 (cdc48a)
03009 Ribosome biogenesis [BR:
nmo03009
]
Nmlp_2391 (cdc48a)
04131 Membrane trafficking [BR:
nmo04131
]
Nmlp_2391 (cdc48a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nmo04147
]
Nmlp_2391 (cdc48a)
Messenger RNA biogenesis [BR:
nmo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Nmlp_2391 (cdc48a)
Ribosome biogenesis [BR:
nmo03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Nmlp_2391 (cdc48a)
Membrane trafficking [BR:
nmo04131
]
SNARE
SNARE associated proteins
Others
Nmlp_2391 (cdc48a)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Nmlp_2391 (cdc48a)
Exosome [BR:
nmo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Nmlp_2391 (cdc48a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
CDC48_2
AAA_16
RuvB_N
AAA_5
TIP49
AAA_22
AAA_2
AAA_33
AAA_14
nSTAND3
NPHP3_N
AAA_28
RNA_helicase
IstB_IS21
Mg_chelatase
AAA_7
ABC_tran
AAA_17
AAA_18
Sigma54_activat
NB-ARC
Parvo_NS1
AAA_3
ATPase
DUF815
SLFN-g3_helicase
AAA_24
AAA_30
TsaE
AAA_11
PhoH
Zeta_toxin
NACHT
Vps4_C
AAA_lid_PRS2_C
DUF2480
Motif
Other DBs
NCBI-ProteinID:
CCQ36559
UniProt:
M1Y260
LinkDB
All DBs
Position
complement(1335991..1338213)
Genome browser
AA seq
740 aa
AA seq
DB search
MNEVQLEVAKAYPNDSGRGIARLDPDTLLHLKLSPGDIIEIEGADTTAAKVWRADRQDWN
TDTVRIDGFTRQNADVGIGERVTIRKAEATKADKLVLAPPEEASVQFGSDAAGMVKRQIL
KRPVVERDIVPVMSSTNHPFMRSPGQAIPLIAVETDPDGVCLVTEDTEVELREEPIAGFE
KTGGGITYEDIGGLQNEIQRVREMVELPMKHPQIFKKLGIEPPQGVLLHGPPGTGKTLLA
KAVANETSASFFSIAGPEIISKYYGESEQQLREIFEDATEESPSIIFIDELDSIAPKRED
VTGEVERRVVAQLLTMMDGLESRGQVIVIAATNRVDAVDPALRRPGRFDREIEIGVPDET
GRKEILQIHTRGMPLADDVSLDTMADETHGFVGADIESLTKEAAMKALRRYLPEIDLDEE
DIPPSLIDRMIIKRDDFRNALNEVDPSAMREVLVELPKVSWDDVGGLTDEKNQVKESVEW
PMNSPEKFDRMGINPPAGVLLYGPPGTGKTLIAKAVANETNANFISVRGPQLLSKWVGES
EKAIRQTFRKARQVSPTVIFFDELDSLAPGRGGEVGSNVSERVVNQLLTELDGLEDMDDV
MVIGATNRPDMIDPALIRSGRFDRLVMIGEPDTEGREQILRIHTDDTPLAPDVSLREIAE
MTGSYVGSDLESIAREAAIEALREDDAADDVEMRHFRQALESVRPTITEDIRSYYDDVED
QFRGGSPDGRRQSGGRIGFQ
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaggttcaactcgaggtcgcgaaggcgtaccccaacgactccggacgggggatc
gcacgcctcgatccggacaccctgctccatctcaagctgtcgccgggtgacataatcgag
atcgaaggcgcggacacgacagcggcgaaagtctggcgggccgaccggcaggactggaac
accgacacggtccggatcgacggcttcaccagacagaacgccgacgtcggcatcggcgag
cgcgtcacgatacggaaggccgaggcgacgaaggcagacaagctcgttctcgccccgccg
gaggaggcgtcggtgcagttcggctccgacgccgcggggatggtcaaacggcagatactc
aagcggccggtcgtcgagcgcgacatcgtccctgtcatgtcctcgacgaaccacccgttt
atgcggtcgccgggacaggccatcccgctcatcgcggtcgagactgacccggacggggtg
tgtctcgtcaccgaggacaccgaggtcgaactccgcgaggaaccgatcgccggcttcgag
aagaccggcggcggcatcacctacgaggacatcggcggcctccaaaacgagatccagcgc
gtccgcgagatggtcgagttgccgatgaaacacccccagatattcaagaagctcggcatc
gagccgccacagggggtattgttgcacggcccgcccggtacgggcaagaccctgcttgcg
aaggcggtcgccaacgagacctccgcctcgttcttctccatcgccggtcccgagatcatc
tcgaagtactacggcgagtccgaacagcaactgcgggagatcttcgaggacgcgaccgag
gagtcgccgtcgatcatcttcatcgacgaactcgattcgatcgcgcccaagcgcgaggac
gtgaccggcgaagtcgaacgccgcgtcgtcgcccaactactgacgatgatggacggcctg
gagtcgcgggggcaagtcatcgtcatcgcggcgacgaaccgcgtggacgccgtcgatccc
gccctccggcggccggggcgtttcgaccgggagatcgagatcggcgtcccggacgagacc
ggacgcaaggaaatcctccagatccacacccgcgggatgccgctggccgacgacgtctcc
ctggacacgatggccgacgagacccacggcttcgtcggcgccgacatcgagagcctcacc
aaggaggccgcgatgaaagcattgcgccgatatctccccgagatcgacctcgacgaggag
gacatcccgccgagcctcatcgaccggatgatcatcaaacgggacgacttccgcaacgcg
ctgaacgaggtcgacccctcggcgatgcgggaggtactcgtcgagttgccgaaggtgtcg
tgggacgacgtcggcggcctcaccgacgagaagaaccaggtcaaagagtccgtcgagtgg
cccatgaacagccccgagaagttcgaccgaatgggaatcaacccgcccgcaggggtgttg
ttgtacggcccgccgggcaccgggaagacgctcatcgcgaaggcggtcgccaacgagacc
aacgcgaacttcatctcggttcgtggcccacaactcctctcgaagtgggtcggcgagagc
gagaaggccatcagacagacgttccggaaggccagacaggtctcgccgacggtgatcttc
ttcgacgaactcgattcgctggcgcccggccgtggcggcgaggtcggctcgaacgtctcc
gagcgggtcgtcaatcaactgctgaccgaactcgacggcctggaggacatggacgacgtg
atggtgatcggcgcgacgaaccgccccgatatgatcgatccggcgctcatccggtcgggt
cggttcgatcggctcgtcatgatcggcgaaccggacacggagggccgagagcagatcctc
cgcatccacaccgacgatacaccgctggcgcccgacgtgagcctccgcgaaatcgccgaa
atgaccggtagctacgtcggctcggatctcgaatcgatcgcccgcgaggcggcgatcgag
gcgctccgcgaggacgacgccgccgacgacgtggagatgcgacacttcagacaggcactg
gagtccgtccgtccgacgatcaccgaggacatccgcagctactacgacgacgtcgaagac
cagttccgcgggggcagcccggacggccgccgacagagcggcggccggatcggcttccag
tag
DBGET
integrated database retrieval system
