Natronomonas moolapensis: Nmlp_2886
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Entry
Nmlp_2886 CDS
T02478
Symbol
tfbA3
Name
(GenBank) transcription initiation factor TFB
KO
K03124
transcription initiation factor TFIIB
Organism
nmo
Natronomonas moolapensis
Pathway
nmo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nmo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Nmlp_2886 (tfbA3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmo03021
]
Nmlp_2886 (tfbA3)
Transcription machinery [BR:
nmo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Nmlp_2886 (tfbA3)
Prokaryotic type
Archaeal type
TFB
Nmlp_2886 (tfbA3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
Sigma70_r4
Zn_ribbon_LysW
HTH_Tnp_ISL3
Zn_ribbon_Nudix
Anti-TRAP
Zn_ribbon_tTFIIB
Zn_ribbon_8
Motif
Other DBs
NCBI-ProteinID:
CCQ37037
UniProt:
M1XL42
LinkDB
All DBs
Position
complement(1850142..1851107)
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AA seq
321 aa
AA seq
DB search
MSEHTRTRTTETETEAETDHEETTGCPECGGRLAADSEHGETVCRDCGLVVEEDEIDRGP
EWRAFDSAEKDQKSRVGAPTTNMMHDKGLSTNIDWRDQDAYGNSLDSRQRQKMQRLRKWN
ERFRTRDSKERNLKQALGEIDRMASALGLPENVRETASVIYRRALDDNLLPGRSIEGVST
ASVYAAARQAGVPRSLDEVAGVSRVEKSEIARTYRYVVRELGLEVAPADPESYVPRFASD
LDLSEEAENRARKLLGNAKEQGVHSGKSPVGLAAAAVYAASLLTNEKTTQAAVSEVADIS
EVTIRNRYHELLEAEQDLAFA
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacatacacgaacacggacgaccgagaccgagaccgaagcggagaccgaccac
gaggagacgaccggctgcccggagtgcggcggccgactcgccgccgattcggagcacggc
gagacagtctgtcgggactgtggcctcgtcgtcgaggaggacgagatcgaccgcgggccc
gagtggcgcgccttcgacagcgccgagaaggatcaaaagtcccgcgtcggcgcccccacc
accaacatgatgcacgacaaggggctctccaccaacatcgactggcgcgatcaggacgcc
tacgggaactccctggactcccggcaacgccagaagatgcagcgactccgcaagtggaac
gagcgcttccgcacgcgggactccaaggagcgcaacctcaaacaggccctcggcgaaatc
gaccgcatggcctccgcgctcggtctccccgaaaacgtccgcgaaaccgcctccgtcatc
taccgccgcgcgctcgacgacaacctcctccccggacgctccatcgaaggcgtctcgacg
gcgtccgtgtacgccgccgccagacaggccggcgtcccgcgcagcctcgacgaggtcgcg
ggcgtctcccgcgtcgaaaagagcgaaatcgcccgcacctaccgctacgtcgtccgcgaa
ctcggcctcgaggtcgcgcctgcggatcccgaaagctacgtgccgcgcttcgccagcgac
ctcgatctctccgaggaggccgaaaaccgcgcgcgcaagctgctcggcaacgccaaagag
cagggcgtccactcggggaagtcgccggtggggctggcggccgccgcggtgtacgccgcc
tcgctgctcaccaacgagaagacgacccaggccgcggtctcggaggtcgcggacatctcc
gaggtcaccatccgcaaccgctatcacgaactgctcgaagccgaacaggacctcgcgttc
gcatag
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