Neisseria meningitidis alpha710 (serogroup B): NMBB_2088
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Entry
NMBB_2088 CDS
T01932
Name
(GenBank) putative DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nmp
Neisseria meningitidis alpha710 (serogroup B)
Pathway
nmp03030
DNA replication
nmp03430
Mismatch repair
nmp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nmp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NMBB_2088
03430 Mismatch repair
NMBB_2088
03440 Homologous recombination
NMBB_2088
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmp03032
]
NMBB_2088
03400 DNA repair and recombination proteins [BR:
nmp03400
]
NMBB_2088
Enzymes [BR:
nmp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NMBB_2088
DNA replication proteins [BR:
nmp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NMBB_2088
DNA repair and recombination proteins [BR:
nmp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NMBB_2088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
DUF7398
Motif
Other DBs
NCBI-ProteinID:
ADO32249
LinkDB
All DBs
Position
1890688..1894122
Genome browser
AA seq
1144 aa
AA seq
DB search
MTEPTYIPLRLHTEFSITDGMVRIKKLIAKAQEYGLPALGISDLMNEFGLVKFYKACRGA
GIKPIGAADVWIGNPNAPDKPFRAMLIIRNDAGYLRLSELLTEAYVGKDRNIHHAELNPE
WLENGDNSGLICLSGAHYGEVGMNLLNGNEDAARAAALKYAAWFPDAFYLELQRLPERPE
WEACVSGSVKLAEELGLPVVATHPTQFMSRDDFNAHEARVCIAGGWVLTDKKRPRDFTPS
QFFIPPETMAERFADLPEALENTVEIAKRCNLHITLGKNFLPLFPTPDGLSRDDYLIKLS
NEGLQERMVQLYPDEAERAEKMPEYQERLDFELNIIIQMKFPGYFLIVQDFINWAKTHGC
PVGPGRGSGAGSLVAYSLKITDLDPLKYALLFERFLNPERVSMPDFDVDFCQANRGRVIE
YVRDKYGAQAVSQIVTFGTMSSKAVIRDVGRVLELPFMLCDKLSKLIPLEANKPLSLDDA
MKAEPQIQELIEAEEADELITLAKKLEDLTRGLGMHAGGVLIAPGKISDYSPVYQADESA
SPVSMYDKGDVEDVGLVKFDFLGLRNLTIIEMAQDNIKNTTGDIIDVGKIPLDDQVAYQI
FRDANTTAVFQFESTGMKKMLKTAHTTKFEELIAFVSLYRPGPMDNIPDFVARMKGQEFQ
YIHPLLEGILAPTYGIMVYQEQVMQAAQIIGGYSLGGADLLRRAMGKKKPEEMVKHREIF
AEGAAKQGISREKSDEIFNYMEKFAGYGFNKSHAAAYALISYQTAWLKAHYPAEFMAATM
SSELDNTDQLKHFYDDCRANGIEFLPPDINESDYRFTPYPDMKIRYALGAIKGTGEAAVE
SIIAARQSGGKFTGLLDFCERVGKEHMNRRTLEALIRGGAFDSIEPNRAMLLANIDLAMD
NADQKAANANQGGLFDMMEDAIEPVRLIDAPMWSESEKLAEEKTVIGFYLSGHPFGPYAQ
EVRQIAPQKLSKLKPQDSVRLAGFVTAVRTMMGKRGKIAFVSLEDLSGQVEIMVGGQTLE
NCADCLKADQVLIIESKVSRDDYGGGDGLRILANQVMTLQMARERYARSLSLALAPHHDI
GGLVQLLAAHQLPDTPRIPLQLSYANEKASGRLQVPPKWTVTPSSALFGELETLLGSRSV
RVNW
NT seq
3435 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagccgacctacatccccctgcgcctgcataccgagttctcaattaccgacggt
atggtgcggattaaaaaactgattgccaaagcgcaggaatacggtttgcctgctttgggc
atcagcgatttgatgaacgaattcggtttggtgaaattctataaagcctgccgcggcgca
gggattaagcccatcggcgcggcggacgtgtggataggcaatccgaatgcgcccgacaag
ccgttccgcgctatgctgattatccgcaacgatgcgggctatctgcgtttgagcgagctt
ttgacagaggcctatgtcggcaaagaccgcaatatccatcatgcggaactcaaccccgaa
tggctggaaaacggcgacaacagcggcttgatttgtttgagcggcgcgcattacggcgaa
gtgggcatgaatctgttgaacggcaatgaagacgcggcgcgcgcggcggcgttgaaatat
gcggcatggtttcccgatgcgttttatttagagctgcaacgcctgcccgaacgccccgaa
tgggaggcttgcgtttccggcagcgtgaagctggcggaggaactgggtttgccggtggtg
gcgacgcatccgacgcagtttatgagccgcgacgatttcaacgcgcacgaggcgcgggtg
tgcatcgcgggcggctgggtattgacggacaagaaacgtccgcgcgatttcacgccgagc
cagtttttcattccgccggaaaccatggccgaacgtttcgccgacttgcccgaggccttg
gaaaacacggtggaaatcgccaaacgctgcaacctgcacatcacattgggcaaaaacttc
ctgccccttttccccacgcccgacggtttatcgcgcgatgactatctcatcaagctctca
aacgagggtttgcaggaacgcatggtccagctttatcccgacgaagcggaacgcgcagaa
aaaatgccggaatatcaggaacgtttggattttgagctgaacatcatcatccagatgaaa
ttccccggctatttccttatcgtacaagactttatcaactgggcgaaaacgcacggctgt
ccggtggggccggggcgcggttcgggcgcgggctcgctggtggcgtattcgctgaaaatt
accgacctcgacccgctgaaatacgcgctgctgttcgaacgtttcttaaaccccgaacgc
gtctccatgcccgacttcgacgttgacttctgtcaggcaaaccgcggccgcgtgatcgaa
tatgtacgcgataaatacggcgctcaggcggtcagccagattgttaccttcggcacgatg
tcgtccaaagcggtcatccgcgacgtggggcgcgtgttggagctgccgtttatgctgtgc
gacaaactgtccaagctgattccgttggaagccaacaaacccctgagtttggacgacgcg
atgaaggcggagccgcagattcaggaattaatcgaagcggaagaagcggacgaactcatt
acgctggcgaaaaagctggaagatttgacgcgcggtctgggtatgcacgcgggcggcgtg
ttgattgcgccgggcaagatttccgattacagccccgtgtatcaggcggacgaatccgcc
tcgcccgtatccatgtacgacaagggcgacgtggaagatgtgggtttggtgaaattcgac
tttttgggtctgcgcaacctgaccattatcgaaatggcgcaggacaacatcaaaaacact
accggcgacatcatcgatgtcggcaaaatcccgcttgacgaccaggtcgcctaccaaatc
ttccgcgatgcgaacaccaccgccgtcttccagttcgagtcgaccggcatgaaaaaaatg
ctgaaaacggcgcacacgaccaagtttgaagaactcatcgccttcgtatcgctctaccgc
cccggcccgatggacaacattcccgacttcgtcgcacgtatgaaggggcaagaattccaa
tacatccatccgctactcgaaggcatcctcgcgccgacctacgggattatggtgtatcag
gaacaagtgatgcaggcggcgcaaattatcggcggttactcgctcggcggcgcggacttg
ttgcgccgcgccatgggtaagaaaaagcccgaagaaatggtgaaacaccgcgaaatcttc
gccgaaggcgcggcaaaacaaggcatttcgcgcgaaaaatccgacgaaatcttcaactac
atggaaaaattcgccggctacggtttcaacaaatcccacgccgccgcctacgccctgatt
tcctaccagaccgcatggctcaaagcccactaccccgccgaatttatggcggcgaccatg
tcgtccgaattggacaacaccgaccagctcaagcatttctacgacgactgccgtgccaac
ggcatcgagttcctgccgcccgacatcaacgaatccgactaccgcttcacgccgtatcca
gacatgaaaatccgctacgcactcggcgcgattaaaggcacgggcgaagccgccgtcgaa
tccatcatcgccgcgcggcaaagcggcggcaagtttaccggcctcttggacttctgcgag
cgcgtcggcaaagaacacatgaaccgccgcaccctcgaggccctgatacgcggcggcgcg
ttcgacagcatcgaacccaaccgcgccatgctcttggcgaacatcgacctcgctatggac
aacgccgaccaaaaagccgccaacgccaatcagggcgggcttttcgacatgatggaagac
gccatcgaaccggtgcggctcatcgacgcgccgatgtggagcgaatcggaaaaactcgcc
gaagaaaaaaccgtcatcggcttttacctgtccggccacccgttcggcccgtatgcccaa
gaagtccgccaaatcgccccgcagaaactgtcgaaactcaaaccgcaagacagcgtgcgc
ctcgccggattcgttaccgccgtacgcaccatgatgggcaagcgcggcaaaatcgccttc
gtcagccttgaagatttgagcggacaggttgaaatcatggtcggcggtcagacgttggaa
aactgcgccgactgcctcaaagccgaccaagtgctgattatcgaatccaaagtcagccgc
gacgactacggcggcggcgacgggctgcgtattctggcaaaccaagtcatgaccctacaa
atggcgcgcgaacgctacgcccgaagcctcagcctcgccctcgccccgcatcacgacatc
ggcggactggtacaactgctcgccgcccaccaactgcccgacacgccgcgcatcccgctg
caactgtcgtatgccaacgaaaaagcgtcgggcaggcttcaagtgccgccgaaatggacg
gttacgccgagttccgcattgttcggcgaactggaaacattgctcggcagccggtcggtg
cgcgtcaactggtaa
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