Neisseria meningitidis alpha710 (serogroup B): NMBB_2309
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Entry
NMBB_2309 CDS
T01932
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
nmp
Neisseria meningitidis alpha710 (serogroup B)
Brite
KEGG Orthology (KO) [BR:
nmp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmp03019
]
NMBB_2309 (hrpA)
Enzymes [BR:
nmp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NMBB_2309 (hrpA)
Messenger RNA biogenesis [BR:
nmp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NMBB_2309 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
HA2_C
HA2_N
zf_C2H2_ZNF598
TraI_middle
Motif
Other DBs
NCBI-ProteinID:
ADO32430
LinkDB
All DBs
Position
2102239..2105484
Genome browser
AA seq
1081 aa
AA seq
DB search
MQNMKNQVRGSGMDARSNPANVSDGLQNSSSHIGTNTRYRLTKLGEQMARLPIDPKIARI
LLAAKKHDCMAEILVIASALSIQDPRERPLEARDAASKAHERFTDKQSDFLAYLNIWDSF
QRERDKGLSNKQLVQWCRQYFLSHLRMREWRELHHQLAQTAIEMGLTTKEAAFRRSPEVR
QLTSSENAGDQDLSAKLKQKQLDKKQHRAQIRAAKEAGYEQIHRALLTGLIANVGMKSPD
GNDYTSTRGSRFHLFPASALFKAKPKWVMAAELVETTKLYARDVAAIQPEWIEQEAPHLV
RYHYFEPHWEQKRGEVIASERVTLYGLTVLPRRPVSYGRIAPEEAREIFIRGALVAQECD
LKADFFVHNKKLIKEITELEHKSRKQDVLVDDEALFAFYNERLPEMAWKDAQGSVWGSED
SVRIIESDKAERSSENERNEFRKNKRNGSRQNENHGNTVGWVENPTSAATAKTVGFDNPT
YATQQPTPSPEREGRGEGKTVAAQTNFSATAANPLPQEREQSASASTFSDDLRPANLQQT
APSPVGEGWGESKTVATQTNFSATSTLSDDPKPKKQPAPQKGRLKPLPLADIRTFQAWLK
TAECDNPRLLFLSRDDLMQHAAAHITEEQFPKFWQTADGKFKLSYRFEPHHPLDGVTMTV
PLTVLNRLHAPSLEWLVPGMLREKIQLLIKALPKQIRRICVPVPDFITKFLESNPDRQAT
IIPQLAHFIAKSASDMRILEQIDQDAWAAQELPEHCYLNLRIIDDGGQELAGGRKLHELQ
QQLGQAAAVTFRDNTQEFERDNVTTWDIGTLPESIKFARGKQQLTGYLGLQKEKDGRIAL
RLFDTTEAAEQAHRQGVIELMKLQLKEQVKDLNKGIQGFTQAAMLLKHINADTLRDDLTQ
AVCDRAFIGEDELPRNEKAFKEQIKRARSRLPAVKEALSRYLQETAAAYAELNGKLGKHP
LTHLLRLRLQTLLAPGFATRTPWAQWPRLPIYLKAMTLRLEKYSSNPARDAAREADIQEL
EQMWQEKNDGLVKQGLPISDGLAAFKWMIEELRVSLFAQELKTPYPVSVKRLMKEWERLN
K
NT seq
3246 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatatgaaaaaccaagtacgcggatcaggcatggatgcacgatccaatccggcc
aatgtttcagacggcctgcaaaacagttcgagccatatcggtaccaacacgcgctaccgc
ctgaccaagctcggcgaacaaatggcgcgcctgcccatcgacccgaaaatcgcgcgcatt
ttgctggcggcgaagaaacacgactgtatggcggaaatattggtgattgcgtccgcgctg
tcgattcaagacccgcgcgagcggccgttggaagcgcgcgatgctgcctccaaggcacac
gaacgttttaccgacaagcagtccgatttccttgcctatctgaacatttgggacagcttc
cagcgtgagcgcgacaaaggtttgtccaacaagcagctggtgcagtggtgccgccaatat
ttcttgtcgcacctgcggatgcgcgaatggcgcgagctacaccaccagcttgcccaaact
gcgattgaaatgggtttgaccaccaaagaagccgctttcagacgttctcccgaagtcagg
cagctcacgtcgtctgaaaatgcaggcgaccaagacctatccgccaaactcaaacaaaaa
caactggataagaaacaacaccgcgcccaaatccgcgctgccaaagaagcgggctacgaa
caaatccaccgcgccctgctcaccggcctcatcgccaacgtcggcatgaaatcacccgac
ggcaacgactacaccagcacgcgcggcagccgcttccaccttttccccgcctccgccctg
ttcaaggcgaagcccaaatgggtgatggcggcagaactcgttgaaacgacaaaactttat
gcccgcgacgtagccgccatccagcccgaatggatcgagcaggaagcgccgcacctcgtc
cgctaccactatttcgagccgcattgggaacaaaaacgcggcgaagtcatcgccagcgaa
cgggtaacgctctacggcctgaccgtcctgccgcgccgccccgtgtcctacggcagaatc
gcccccgaagaagcgcgcgaaatctttatccgcggcgcattggtggcacaggaatgcgat
ttgaaagcggacttttttgtccacaacaaaaagctgattaaagaaattaccgaactcgaa
cacaaatcgcgcaagcaagacgtgctggtcgatgacgaagccctgtttgcgttttataac
gaacgactgcccgaaatggcttggaaagacgcgcaaggcagcgtttggggaagtgaagat
tccgtacggattattgaatctgacaaagccgagaggtcgtctgaaaatgagcgcaacgag
tttcgtaaaaacaagcgtaatgggtctcgccaaaatgaaaatcacggcaacaccgtaggt
tgggttgaaaacccaacatcagccgcaactgcaaaaactgttgggtttgacaacccaacc
tacgctactcagcaacccaccccctcccccgagagggagggtcggggagagggcaaaaca
gttgccgcacaaaccaacttttccgcaaccgcagcaaaccctctcccgcaggagagggaa
cagagtgcctcagcttcaacgttttcagacgacctgcgtcctgcaaatctgcagcaaacc
gccccctcccccgtgggggagggctggggagagagcaaaacagttgccacccaaaccaac
ttttccgcaacctcaacactttcagacgaccccaaacccaaaaagcagcctgcacctcaa
aaaggccgtctgaaacccctacccctcgccgacatccgcaccttccaagcctggctcaaa
accgccgagtgcgacaatccgcgcctgctgttcctcagccgcgacgatctgatgcaacac
gccgccgcacacattaccgaagaacagttccccaaattctggcaaaccgcagacggcaaa
ttcaaactttcctaccgcttcgagccgcaccatccgctagacggcgtgaccatgaccgtg
ccgctgaccgtcctcaaccgcctgcacgcgccatcgctcgaatggctggtgcccggtatg
ttgcgcgaaaaaatccagctgctgattaaagcactgccgaagcaaatccgccgcatttgt
gtgcccgtacccgatttcatcaccaaattcctcgaaagcaatcccgaccgccaagcgacc
atcattccccagttggcgcactttatcgccaaaagcgccagcgatatgcggattctcgag
caaatcgaccaagacgcatgggcggcgcaagaattgcccgaacactgctatctgaatctg
cgcattatcgacgacggcggacaagagcttgccggcggccgcaaactgcacgaattgcaa
caacagctcggccaagccgccgccgtcaccttccgcgacaacacccaagaattcgagcgc
gacaacgttaccacatgggacatcggaaccctgcccgaatccatcaaattcgcccgcggc
aaacaacagctcaccggctacctcggcctgcaaaaagaaaaagacggccgcatcgccctg
cgcctgtttgacaccaccgaagccgccgaacaggcacaccgtcaaggcgtcatcgaattg
atgaagctgcaattaaaagagcaggtaaaagacctgaacaaaggcatccaaggcttcacc
caagccgccatgctgctcaaacacatcaacgccgacaccctgcgcgacgacctcacccaa
gccgtctgcgaccgcgcctttatcggcgaagacgagctgccgcgcaacgaaaaagccttc
aaagaacaaatcaaacgcgcccgtagccgcctgcccgccgtcaaagaagccctcagccgc
tacctgcaggaaaccgcagccgcctacgccgaactcaacggcaaactcggcaaacatcca
ttgacccacctcctaagactacgcctgcaaaccctgcttgcccccggcttcgccacccgc
accccgtgggcacaatggccgcgcctccccatctacctcaaagccatgaccctgcgcctc
gaaaaatacagcagcaaccccgcccgcgacgcagcccgcgaagccgatatacaggaattg
gaacaaatgtggcaggaaaaaaacgacggtttggtgaaacaaggtctccccatttcagac
ggcctcgccgcgtttaaatggatgattgaagaattgagggtgtcgctgttcgcgcaggaa
ttgaagacgccttatccggtgtcggtgaagcggttgatgaaggagtgggagaggttgaat
aagtag
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