Neisseria meningitidis M04-240196 (serogroup B): NMBM04240196_0289
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Entry
NMBM04240196_0289 CDS
T01948
Name
(GenBank) putative exonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
nmq
Neisseria meningitidis M04-240196 (serogroup B)
Brite
KEGG Orthology (KO) [BR:
nmq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nmq03016
]
NMBM04240196_0289
Enzymes [BR:
nmq01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NMBM04240196_0289
Transfer RNA biogenesis [BR:
nmq03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
NMBM04240196_0289
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
ADZ00820
LinkDB
All DBs
Position
complement(293595..295475)
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AA seq
626 aa
AA seq
DB search
MNIFYEESGQFKIAAIIQKNDATYQVDTPHGKRTKVKANNVFAEFDGDMAAFLENAQAQA
ADIDTDLLWEVCGEEEFTAEAIAEEYYGHAPTKTELAATLIALYAAPVYFYKKAKGVFKA
APEETLKQALAAIERKKQQDAQIDAWAEALKRGEMPSEIAADLKTILHAPDKQSLTYKAF
TKAADALKTSAYELAKKTGGITSIPQYLQDGFEIKYFPKGTGFPDLALPEMPDLPKADVT
AFSIDDESTTEVDDALSLTDLGNGMKRVGIHIAAPSLAVKPGDKMEKNIMERLSTVYFPG
GKITMLPENWIAAFSLDAGAYRPAVSIYFDVDSKFNVGEPTCKIEAVNIAENLRIQTIEP
HFNAEAGLDEAGEMMFAHHQDLIWFYQFAITLQKARGKYEPDRAPQYDYSIELDEEGKVS
VVRRERGSPIDTLVSEMMILANSTWAQMLHDNDLPGLFRVQPTGKVRMSTKSEPHIGMGV
QHYGWFTSPLRRAADYINQKQLISLIDDTAEPLYQNSDAELFAALRDFDAAYTAYADFQR
QMEAYWSLVYLQQQGTSELTATILKEDLVRIEGLPLVTRATGIPFDALPKSQALFKITEL
DAEKQFVSLNYIKAVAPAGTTAGNAV
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgaatattttttacgaagagtccggccaattcaaaatcgccgccatcatccaaaaaaac
gacgctacctaccaagtcgataccccacacggcaaacgcaccaaagtgaaggcgaacaac
gtctttgccgagtttgacggcgatatggcggcgtttttggaaaacgcgcaggcgcaggcg
gcggacatcgacaccgatttattgtgggaagtgtgcggcgaagaggaatttaccgctgaa
gccatagccgaagaatattacggccatgcgccgaccaaaaccgaactggcggcgaccttg
attgcgctgtacgccgcgccggtgtatttctacaaaaaagccaaaggcgtgttcaaagcc
gcgcccgaagaaactttaaaacaagcacttgccgccatcgaacgcaaaaaacagcaagac
gcgcaaatcgatgcttgggcggaagccttgaaacgcggcgagatgccgtctgaaatcgcg
gcggatttgaaaaccatcctgcacgcgcccgacaagcagtcgctgacctacaaagccttt
accaaagccgccgacgcgctgaaaacctctgcctacgaattggcgaaaaaaacgggcggc
attacgtccattccccaatacctgcaagacggatttgaaatcaaatactttcctaaaggc
acaggcttccccgaccttgcccttcctgaaatgcccgacctgcctaaagccgacgttacc
gccttttccattgacgacgaatcgaccaccgaagtggacgacgctttaagcctgaccgac
ttgggcaacggtatgaaacgcgtcggcatccacatcgccgcgccgtcacttgccgttaaa
ccgggcgacaaaatggaaaaaaacatcatggaacgcttgagtacggtttatttccccggc
ggcaaaatcaccatgctgcccgaaaactggattgccgcgttcagccttgatgcaggcgca
taccgccctgccgtcagcatttatttcgatgtggacagcaaattcaacgtcggcgagccg
acctgtaaaatcgaagcggtcaacatcgccgaaaacctgcgcattcaaaccatcgagccg
catttcaacgccgaagcgggcttggacgaagcgggcgaaatgatgttcgcccaccatcaa
gacctgatttggttttatcaattcgccatcaccctgcaaaaagcgcgcggcaaatacgaa
cccgaccgcgcgccgcaatacgattacagcatcgaattggatgaggaaggcaaagtctcc
gtcgtccgccgcgaacgcggttcgcccatcgatacgctggtcagcgagatgatgattctt
gccaacagcacttgggcacaaatgctccatgacaacgacctgcccggcctcttccgcgtc
caacccaccggaaaagtgcgcatgagcaccaaatccgagccgcatatcggcatgggcgtg
cagcattacggctggtttacctcgccgctgcgccgcgccgccgactacatcaaccaaaag
cagctgatcagcctgatcgacgacactgccgaaccgctgtatcaaaacagcgatgccgaa
ctcttcgccgccctgcgcgactttgatgccgcctataccgcctacgccgacttccaacgc
caaatggaagcctactggagcctggtttacctgcaacagcaaggcacgagcgagctgacg
gcgacgattctgaaagaagacctcgtccgcatcgaaggtctgccgctagtaacacgcgcg
accggtattccgtttgacgcgctgcccaaatcacaggcattgttcaaaatcaccgaatta
gatgccgagaagcagtttgtctcgctcaactacatcaaggcagtcgcacccgcgggtaca
acggcaggcaatgccgtctga
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