Nitrosopumilus maritimus: Nmar_0011
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Entry
Nmar_0011 CDS
T00626
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nmr
Nitrosopumilus maritimus
Pathway
nmr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Nmar_0011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmr03019
]
Nmar_0011
03009 Ribosome biogenesis [BR:
nmr03009
]
Nmar_0011
04131 Membrane trafficking [BR:
nmr04131
]
Nmar_0011
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nmr04147
]
Nmar_0011
Messenger RNA biogenesis [BR:
nmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Nmar_0011
Ribosome biogenesis [BR:
nmr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Nmar_0011
Membrane trafficking [BR:
nmr04131
]
SNARE
SNARE associated proteins
Others
Nmar_0011
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Nmar_0011
Exosome [BR:
nmr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Nmar_0011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_2
AAA_5
CDC48_2
AAA_14
AAA_22
TIP49
AAA_lid_PRS2_C
AAA_33
nSTAND3
Mg_chelatase
NPHP3_N
AAA_28
RNA_helicase
IstB_IS21
AAA_18
ABC_tran
AAA_7
AAA_24
Zeta_toxin
Sigma54_activat
DUF5906
Parvo_NS1
AAA_3
AAA_11
DUF815
AAA_17
TsaE
AAA_30
bpMoxR
PhoH
SLFN-g3_helicase
ResIII
AAA_19
ATPase
KAP_NTPase
Vps4_C
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ABX11911
UniProt:
A9A502
LinkDB
All DBs
Position
9889..12030
Genome browser
AA seq
713 aa
AA seq
DB search
MSEIILKVDEIPQQHVGRGRAIIDPKIIEDNKWNTGQILELTYNKKTHVKLWPGNPEEYG
TGIIKIDGMARQNIGAGIGDKISLKSVEAANAEQIVLSPTEKISAEGLQEYMTYNYLNHV
FTTGDTLSLNTQMGGRVQFIVTSTKPSKPVIVTENTIFKLGTMTKSVDASVPRITYDELG
GLKNEVQKIREMVELPMRHPELFDKIGVEAPKGVLLYGPPGTGKTLLAKAVAGETNAHFI
SLSGPEIMGKYYGESEEKIREIFNQAEENSPSIIFIDEIDSIAPKRDEVSGEVEKRIVSQ
LLTLMDGMKSRGKVVVIAATNRPDSIDPALRRPGRFDREIEIGIPDDEGRFEILSIHTRG
MPIDEKVDLKQISKTTHGFVGADLEVLSKEAAMRSLRRILPEIDLDEDKISAEILQKIEI
TSEDFRDALKEVRPSALREVQVQIPNVSWDDVGGLDELKEELREAVEWPIKHKEAFDYVD
VETPKGILLHGPPGTGKTLIAKALAKMTESNFISIKGPELLSKWVGESEKGVREIFRKAR
QAAPCIIFLDEVDALVPRRGSGGSESHVTESVVSQILTEIDGLEELHNVLIVGATNRLDI
VDDALLRPGRFDRIIEVPNPDAKGRRNIFEIHTKKKPLASDVDIAKLVELTDGFSGAEIA
AVANRAAIAALKKYVSGKAQNVKDIKISQQELVDAIDKVKPRKKEIPLAQSIK
NT seq
2142 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaattattttaaaagttgatgaaattccgcaacaacatgttggaagaggaaga
gcaataattgatcctaaaattattgaagataacaaatggaatactggccaaatcttagaa
ttaacatataacaaaaaaacacatgtaaaactttggccaggaaatcctgaagaatatggt
acaggaattatcaaaattgatggaatggcaagacaaaacattggagcaggaattggtgat
aaaatttctttaaaatccgttgaagctgcaaacgcagaacagattgttttgtctcctact
gagaaaatatctgctgaaggattacaagaatacatgacctataactatcttaatcatgta
tttacaactggagatacattatctcttaacactcagatgggtggacgagttcaattcatt
gtaactagcacaaaaccttcaaaaccagtaattgttactgaaaatacaattttcaaactt
ggcacaatgacaaaatcagttgatgcttctgttccaagaataacatatgatgaactaggt
ggtctcaaaaacgaagtccaaaaaattcgtgagatggtagaattaccaatgaggcatcca
gagctatttgataaaattggtgtagaagctccaaaaggagttttattatatggccctcca
ggtacaggaaaaactcttcttgcaaaggcagtagctggtgaaactaatgcccactttatc
tcacttagtggtcctgaaatcatgggcaagtactatggtgaaagtgaagaaaaaattaga
gagatcttcaatcaagctgaagagaattctccaagcataatcttcattgatgagatagat
tccattgctccaaaaagagacgaagtttcaggagaagttgaaaagagaattgtttcgcaa
cttttgactttgatggatggaatgaaatctagaggtaaagttgtagttattgcagctacc
aatagaccagactctattgatcctgcacttagaagacctggaagatttgatagagaaatt
gaaattggaattcctgatgatgaaggaagatttgaaattctttcaatccacacacgtgga
atgccgatagatgaaaaggtagatctcaaacaaatctcaaagacaacacatggatttgtt
ggagctgacttggaagtcttgtcaaaagaagctgcaatgagatcactgcgtagaattctt
cctgagatagatcttgatgaagataagatatctgcagaaattctacaaaaaatagagata
acaagtgaagactttagagatgcactaaaagaagtcagaccaagtgcattacgtgaagtc
caagtacagattcctaacgtaagttgggatgatgttggtggtcttgatgaactaaaagaa
gaattacgtgaggcagttgaatggcctatcaaacacaaagaagcatttgactatgttgat
gttgaaacaccaaaaggaatcctattacatggtccacctggaactggtaagacattgatt
gcaaaagctcttgcaaaaatgacagagtctaattttatcagcataaagggaccagaatta
ctctcaaaatgggtcggcgaatctgaaaaaggagtcagagaaatcttcagaaaagcacga
caagcagcaccttgtataatcttcttagatgaagtagatgcactagtacccagaagaggc
agtggtggttcagaatcacatgtaacagagagtgtggtatctcaaattctaactgagata
gatggactagaagaactacacaatgtgttgatagttggtgcaacaaatcgattagacatt
gtagatgatgcactgcttagacctggaagatttgatagaatcatcgaagttccaaatcca
gatgcaaaaggaagacgaaacatatttgagattcatacaaaaaagaaaccacttgcaagt
gatgtggatattgcaaaacttgtagagttgactgatggatttagtggagctgaaattgca
gcagttgcaaacagagcagcaatagcagctcttaaaaaatatgttagcggcaaagcacaa
aatgtcaaagacatcaagatatctcaacaagaactagttgatgcaattgacaaggtaaag
cctcgcaaaaaagagattccacttgctcagtccataaaatag
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