KEGG   Nitrosopumilus maritimus: Nmar_0020
Entry
Nmar_0020         CDS       T00626                                 
Name
(GenBank) Transcription factor TFIIB cyclin-related
  KO
K03124  transcription initiation factor TFIIB
Organism
nmr  Nitrosopumilus maritimus
Pathway
nmr03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:nmr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    Nmar_0020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nmr03021]
    Nmar_0020
Transcription machinery [BR:nmr03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIB
     Nmar_0020
 Prokaryotic type
  Archaeal type
    TFB
     Nmar_0020
SSDB
Motif
Pfam: TFIIB Zn_Ribbon_TF Baculo_ME53 HTH_11 Cyclin_N Zn_Ribbon_1 Trm112p Sigma70_r4 RPA_interact_C HTH_AsnC-type Ribosomal_S27 Auto_anti-p27 Sigma70_r4_2 Zn_ribbon_RRN7 HEF_HK
Other DBs
NCBI-ProteinID: ABX11920
UniProt: A9A511
LinkDB
Position
16889..17794
AA seq 301 aa
MVSKTKELCPRCAQGKLVTDNESGEMFCSKCGFVITEKLQEAGPEWRSFTQDEHGDRARA
GAPTSLTMHDMGLATIINPVNKDASGRPLTASMKSTIERLRTWDSRSQVHEPVDRNFRQA
FSELNRLKDKLAISDAVIEKAAYIYRKALDKGLVRGRSISALMASALYAACRDTETPRNL
KDVEQAANIKRKDIARCYRLLVKELDLKMPVTDSIQCVARIASRIGIAEKTKRYAVKVLK
KAQENEVSAGKDPMGLAAAALYLSCVKNGEDKTQRDIAEAANVTEVTIRNRYKGLKESLE
L
NT seq 906 nt   +upstreamnt  +downstreamnt
atggtaagtaaaacaaaagaactctgtccaagatgtgcacagggaaaattagtaactgat
aatgaatctggagaaatgttttgctccaaatgtggttttgtaattactgaaaaattacaa
gaggcaggtccagaatggcgttcttttacacaagatgaacatggagatcgagcaagagca
ggagctcctacttcattaacaatgcatgatatgggtcttgcaacaattatcaatccagta
aacaaggatgcatctggtagaccacttacagcttcaatgaaaagtaccattgagagatta
aggacctgggatagtagaagtcaggttcatgaaccagttgacagaaactttagacaagca
tttagtgaattaaacagactaaaagataaactagcaatttctgatgcagtaattgaaaag
gcagcttacatttacagaaaagcccttgacaaaggacttgttagaggccgttctatttca
gcactaatggcatcagcactttatgctgcatgtcgtgatactgaaactccaagaaatctc
aaagatgtagagcaagcagcaaatatcaaaagaaaagatatcgcaagatgttacagatta
ctcgttaaagaacttgatttgaagatgccagttacagattcaattcaatgtgttgcaaga
attgcaagtagaattggaattgcagagaaaacaaaaagatacgcagtcaaagttctcaaa
aaagcacaagaaaatgaggtttctgcaggaaaagatcctatgggattagctgctgcagca
ttatacctatcatgtgtcaaaaatggtgaggataagactcaaagagacattgcagaggct
gcaaatgtaactgaagttactatcagaaacaggtacaaaggactcaaagagtcacttgaa
ctataa

DBGET integrated database retrieval system