Nitrosopumilus maritimus: Nmar_0101
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Entry
Nmar_0101 CDS
T00626
Name
(GenBank) AAA family ATPase, CDC48 subfamily
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
nmr
Nitrosopumilus maritimus
Pathway
nmr04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
nmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
Nmar_0101
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmr03019
]
Nmar_0101
03009 Ribosome biogenesis [BR:
nmr03009
]
Nmar_0101
04131 Membrane trafficking [BR:
nmr04131
]
Nmar_0101
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
nmr04147
]
Nmar_0101
Messenger RNA biogenesis [BR:
nmr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
Nmar_0101
Ribosome biogenesis [BR:
nmr03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
Nmar_0101
Membrane trafficking [BR:
nmr04131
]
SNARE
SNARE associated proteins
Others
Nmar_0101
Autophagy
Aggrephagy
Other aggrephagy associated proteins
Nmar_0101
Exosome [BR:
nmr04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Nmar_0101
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
CDC48_N
AAA_lid_3
AAA_16
RuvB_N
AAA_2
CDC48_2
TIP49
AAA_22
AAA_14
AAA_5
AAA_33
AAA_28
RNA_helicase
Sigma54_activat
IstB_IS21
nSTAND3
AAA_7
NPHP3_N
ATPase
AAA_24
Mg_chelatase
ABC_tran
Bac_DnaA
ATPase_2
TsaE
NB-ARC
NACHT
PhoH
AAA_18
DUF815
Parvo_NS1
AAA_lid_PRS2_C
ATP-synt_ab
AAA_30
Cytidylate_kin
Zeta_toxin
AAA_3
SLFN-g3_helicase
DUF5906
AAA_17
Motif
Other DBs
NCBI-ProteinID:
ABX12001
UniProt:
A9A140
LinkDB
All DBs
Position
complement(91543..93711)
Genome browser
AA seq
722 aa
AA seq
DB search
MSQNALSLKVLEAYTRDVGRGVARIDYDSMDTLNASTGDVIEIKGKRRTVAKCLPLYPSD
EGKGIIRIDGLGRNNSGIAIGDTISVRKIKAVAAEKVVVAPLEAIPPIDERYLADALESV
PLIKGDNVMVPYFGGRLTFQVIGVTPAADAVLITQKTVFHIAEKGETLRGVPQVTYEDIG
GLTDEIKKVREMIELPLRHPEIFEKLGIEAPKGVLLYGPPGTGKTLLAKAVANESNAHFI
SISGPEIMSKFYGESEARLREIFKEAREKAPSIIFVDEIDSIAPKREEVTGEVERRVVSQ
MLSLMDGLEARGKVIVISATNRPNAIDPALRRPGRFDREIEIKVPDKKGRKDILAIHSRN
MPLSDDVNVDKISAISHGYVGADLEYLCKEAAMKCLRRLLPILNLEEEKIPPETLDKLIV
NHEDFQKALIEVTPSGMREVFIENPDVKWDEVGGLEDVKRELQEAVEWPMKYPALYDKLG
HSMPRGILLHGPSGTGKTLLAKAVATQSEANFVSVRGPELLSKWVGESERGIREIFKRAR
QSAPCVVFFDEIDSIAPIRGAGGETAVTERVVSQLLTELDGMENMHGVVVLAATNRADMI
DPALLRPGRFDKIIQVPNPDKDSRKRILEINAEKIPMGDDVDMEKIAEITDGMSGADTSS
IANTAVSLVIHEFLDKHPDVKDVEKSSIEAKVTMKHFEEAVKKVREQKDLKMGEKLVASY
YR
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaaacgcactttctctcaaagttttagaggcatacactagagatgtcggaaga
ggagtagcaagaatagattatgattctatggatacattaaatgcatccacaggcgatgtt
attgaaattaaaggtaaaagaagaacagttgcaaaatgtcttccattatacccatctgat
gaaggaaagggaattatcagaattgatggccttggaaggaataattcaggaattgcaatt
ggagatacaatttcagttaggaaaatcaaagccgtagctgcagaaaaggtcgtagttgct
ccattagaagcaattccaccaattgatgaaagatatcttgcggatgctttagaaagtgtt
cctttgattaaaggagacaatgtaatggtgccatactttggtggacgtttaacttttcaa
gtaattggagtcacaccagctgctgatgcagttttgatcacccaaaagacagttttccat
attgcagaaaaaggtgaaacattacgtggagttccacaagtaacctatgaagacattgga
ggtttgactgatgagataaagaaagtaagagaaatgattgaactcccattaagacatcct
gaaatttttgaaaaactaggaattgaagctccaaaaggtgttttactttatggtccacca
ggaacaggtaaaacattactagcaaaagctgttgcaaacgaaagtaatgcacactttatc
agtatttcaggtccagaaattatgagtaagttttatggtgaaagtgaagcaagattaaga
gagattttcaaagaagcaagagaaaaggccccttcaataatctttgttgatgaaatagat
tctattgcaccaaaaagagaagaagttaccggagaagttgaaagaagagtagtatctcag
atgttatcattaatggatggattagaagcaagaggtaaagtcattgtaatttctgcaaca
aatagaccaaatgcaattgatcctgcacttagaagaccaggaagatttgatagagagatt
gagatcaaagtaccagataaaaaaggaagaaaagacattcttgcaattcacagcagaaac
atgccattatctgacgatgtaaacgtggataaaatttcagcaattagccacggatatgtt
ggtgcagacttggaatacctctgtaaagaggctgcaatgaaatgtttgagaagattatta
ccaattctaaatctcgaagaagaaaaaatcccacctgagactttggataaattaattgta
aatcatgaagatttccaaaaagccctaattgaggtaactccatctggaatgagagaagtt
ttcattgaaaatccagatgtaaaatgggatgaagttggcggtttagaggatgttaaacgt
gaattacaagaagcagttgaatggccaatgaaatatccagcactatatgacaaacttggt
cacagcatgccaagaggaatattgcttcacggtcctagtggtactggtaaaacattacta
gcaaaagctgttgcaacccaaagtgaagcaaactttgtttcagttagaggtcctgagtta
ttatcaaaatgggtaggcgaatctgaaagaggaattagagaaattttcaaaagagcaaga
caatctgccccatgtgtagttttctttgatgaaattgattctattgcaccaattagagga
gcaggtggagaaactgcagttactgaaagagttgtcagccaattacttacagagttagat
ggaatggaaaacatgcatggagttgttgttctagctgcaacaaacagagcagacatgatt
gatccagcattgttaagaccaggaagatttgataaaattattcaagtaccaaatccagat
aaagatagtagaaaacgtattcttgaaattaatgctgaaaaaattcctatgggtgatgat
gtagatatggaaaagattgcagaaattacagatggaatgagtggtgcagatacttcatct
attgcaaatacagcagtttcattagtaattcatgaattcctagacaaacatccagatgta
aaagatgttgaaaagagcagcatagaagccaaagtaacaatgaaacactttgaagaagca
gtaaagaaagtaagagaacaaaaagacctcaagatgggtgaaaagctagttgcttcctat
tacaggtag
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