Nitrosopumilus maritimus: Nmar_0432
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Entry
Nmar_0432 CDS
T00626
Name
(GenBank) exosome complex exonuclease 1
KO
K11600
exosome complex component RRP41
Organism
nmr
Nitrosopumilus maritimus
Pathway
nmr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Nmar_0432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmr03019
]
Nmar_0432
Messenger RNA biogenesis [BR:
nmr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
Nmar_0432
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Cofactors
Nmar_0432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-ProteinID:
ABX12328
UniProt:
A9A5C9
LinkDB
All DBs
Position
384908..385642
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AA seq
244 aa
AA seq
DB search
MGGREATMVLMDENGKRCDGRTVDEPRRIMIKAGGLKNADGSSYIEFGDNKILVGVFGPR
DVHPKHMSDTDTGILRVRYHMEPFSVGERKNPAPSRREIEISKVIKEALEPAVMLEKFPR
TAVDVFIEVLQADGGTRCAALTAASVALADAGIPMRDMVAAIAAGKVADTVILDVNNEED
QAGQADMPIGYMPNLEKITLLQLDGVLTPEEYKKCIQVGVDGCKLVYELQKKALNDKYFG
NKGD
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgggtggacgagaagcaacaatggtccttatggacgaaaatggaaaacgttgtgacgga
cgtacagttgatgaaccacgtcgaattatgattaaagctggtggactcaaaaatgcagat
ggttcatcttacattgaatttggtgataacaaaattctagttggagtatttggtcctaga
gatgttcatccaaaacacatgtctgatactgacactggtattttgagagttagatatcac
atggaaccattctctgttggtgagagaaagaatcctgcaccttcaagaagagagattgaa
atttccaaagtaatcaaagaagcattagagcctgcagtcatgttagaaaaattcccaaga
actgcagttgatgtatttatcgaagttttacaagcagacggtggaactagatgtgccgca
cttacagcagcatctgtcgcactagctgatgctggaattccaatgagagatatggttgca
gcaattgctgcaggcaaagttgcagatactgtgattcttgatgttaacaatgaagaagac
caagcaggtcaagcagacatgccaattggttacatgccaaatcttgaaaaaattacacta
ttgcaattagatggcgttcttactcctgaagaatacaaaaaatgtattcaagttggagtt
gatggatgcaaactagtttatgaattacaaaagaaagcactcaacgacaaatactttgga
aacaagggagattag
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