Nitrosopumilus maritimus: Nmar_0450
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Entry
Nmar_0450 CDS
T00626
Name
(GenBank) tRNA intron endonuclease
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
nmr
Nitrosopumilus maritimus
Brite
KEGG Orthology (KO) [BR:
nmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nmr03016
]
Nmar_0450
Enzymes [BR:
nmr01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
Nmar_0450
Transfer RNA biogenesis [BR:
nmr03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
Nmar_0450
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Motif
Other DBs
NCBI-ProteinID:
ABX12346
UniProt:
A9A5E7
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All DBs
Position
398850..399449
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AA seq
199 aa
AA seq
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MLIWKSFGFLFIMEETPLVRGTLVSDQACISDKKMIHELELKGYGEIEKEKFFLKQFETL
YLLYTNKLILKKGKKEIDFDFFMNVCQKNDSEILTKFLIYRDLRNRGYVVKDGFGFGSDF
RVYERGHFGEKGAKFLIFGLNEGQQEKMGALQKKIQEITQMGKEPIIAVIERRGEVIYYK
INKMNFYENKARLEESFNL
NT seq
600 nt
NT seq
+upstream
nt +downstream
nt
atgcttatatggaaatcatttggttttcttttcatcatggaagaaacccctttggtccgt
ggcacattggtttcagatcaagcctgtatttctgataagaaaatgattcatgaacttgaa
ctaaagggatatggggaaattgaaaaagaaaaattcttcttaaaacaatttgaaactctt
tatcttctgtatactaacaaactaattctaaagaaaggcaaaaaagaaattgattttgat
tttttcatgaatgtctgtcaaaagaatgattctgaaattctaactaaatttttgatatac
cgtgaccttaggaatcgtggatatgttgtaaaagatggatttggatttggttctgacttt
agagtgtatgaaagaggacactttggtgagaaaggagcaaaatttttgatatttggtcta
aatgaaggccaacaagaaaagatgggtgcactacaaaaaaagattcaagagattactcaa
atgggaaaagaaccaataattgcagttattgaacgtcgtggtgaagttatctattacaaa
attaacaaaatgaacttttatgaaaacaaagcaagactggaagaatcatttaatctttga
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