Nitrosopumilus maritimus: Nmar_0517
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Entry
Nmar_0517 CDS
T00626
Name
(GenBank) Zinc finger TFIIB-type domain protein
KO
K03124
transcription initiation factor TFIIB
Organism
nmr
Nitrosopumilus maritimus
Pathway
nmr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nmr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Nmar_0517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmr03021
]
Nmar_0517
Transcription machinery [BR:
nmr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Nmar_0517
Prokaryotic type
Archaeal type
TFB
Nmar_0517
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Trm112p
RPA_interact_C
Zn_ribbon_RRN7
Zn_ribbon_LysW
Zn_ribbon_tTFIIB
Motif
Other DBs
NCBI-ProteinID:
ABX12413
UniProt:
A9A200
LinkDB
All DBs
Position
complement(463382..464338)
Genome browser
AA seq
318 aa
AA seq
DB search
MNALEEQNCPECQATVVNDMQNGELICSGCGVVVADQVADYGPETISSNLEDKMKLARAT
GQTTYSQHDLGITTEIAISTKDFSGKTINHEVANQMHNLRKWQQRVRVSSPKERRLANVL
TKMGETCDGLGLSKNVLETASMIYRNLDGHVDVKGKSVVSITAATIYMACKQCDVVRSLE
EIIRGICPPKDVKSKTKLAARYYRTMVMEMGQLTAPVVTMDKYISKIANMTQTEVRVERL
ALEIAEKTKDSSIADGKAPNGIAAAYLYVSSVLLGQNVLQRDVSSIAGVTEVTIRNRCKE
ILTNYKLKITLRPSLAKY
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcactagaagaacaaaactgtcctgaatgtcaagcaacagtagttaatgacatg
cagaatggtgaattaatctgctctggttgcggtgtagtagtcgcagatcaagtagcagat
tatggtccagaaacaattagttcgaatcttgaagacaagatgaaattagcaagagcaacc
ggacaaacaacatattcccaacacgatttgggaattacgactgagatagcaattagtaca
aaggactttagtggaaaaacaatcaaccacgaagttgcaaaccaaatgcacaatctcaga
aagtggcaacaaagagtaagagtatcctcaccaaaagagagacgacttgcaaatgtttta
acaaaaatgggagaaacatgtgacggtctaggtctttcaaaaaatgtgttggagactgct
tctatgatatacagaaacttggacggacatgttgatgtgaagggaaaatcagtagtaagc
attacagcagctacaatttacatggcatgcaaacaatgtgatgtagtaagatcactagaa
gaaattattcgtggaatttgtccaccaaaagacgtaaaatcaaaaacaaaacttgcagca
agatactacagaaccatggttatggaaatgggacaactaactgctccagtagtaactatg
gacaaatacatctcaaagatagcaaacatgacacaaactgaggttagagtagagagacta
gccttggaaattgcagaaaaaacaaaagacagtagtattgctgatggaaaggctccaaat
ggaattgctgcagcatacctgtatgtgtcatcagtcctgcttggtcaaaacgtactccaa
agagacgtttcaagcattgcaggagtaactgaagttactatcagaaatagatgtaaagag
attctaacaaattacaaactcaaaattactttgagaccatctctggccaaatattaa
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