Nitrosopumilus maritimus: Nmar_0624
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Entry
Nmar_0624 CDS
T00626
Name
(GenBank) Transcription factor TFIIB cyclin-related
KO
K03124
transcription initiation factor TFIIB
Organism
nmr
Nitrosopumilus maritimus
Pathway
nmr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nmr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Nmar_0624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmr03021
]
Nmar_0624
Transcription machinery [BR:
nmr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Nmar_0624
Prokaryotic type
Archaeal type
TFB
Nmar_0624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Sigma70_r4
HTH_AsnC-type
Cyclin_N
Ribosomal_S27
RPW8
HEF_HK
HTH_3
zf-HIT
Zn_ribbon_TiaS
Auto_anti-p27
zf-CCHC_5
Lar_restr_allev
Motif
Other DBs
NCBI-ProteinID:
ABX12520
UniProt:
A9A391
LinkDB
All DBs
Position
complement(564972..565880)
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AA seq
302 aa
AA seq
DB search
MVKGENQKYKCPRCGKGTLVTDPNTGENFCGACGFVITEKVEESGPEWRSFSNEGENKSR
AGVPTSLAMHDMGLATVINPQNRDATGKPLTASMKSTIERLRTWDSRSQVHEPVDRNFRQ
AFSELDRLKDKLAVGDAVIEKAAYIYRKALEKGLVRGRSISALIASALYAACRDTETPRT
LKDIGQASNIKRKDIARCYRLLLRELNLKMPVVDPIKCISRIASKAGLSEKTKRKATKIL
QTAEENKISAGKDPMGLAAAALYVACVTNGENKTQRDVAEAAGVTEVTIRNRYKGLKVAL
NL
NT seq
909 nt
NT seq
+upstream
nt +downstream
nt
atggttaaaggagaaaatcaaaaatacaaatgtccaaggtgtggaaaaggcacactagtt
actgatccaaacactggagagaatttttgcggagcatgtggatttgtaattactgaaaaa
gttgaagagtcaggtccggaatggagatccttttcaaatgaaggtgaaaacaaaagcaga
gcaggagttccaacatcacttgcaatgcacgatatgggattagctactgtaatcaatcct
caaaacagagatgcaactggaaaaccattaacagcttcaatgaaaagtactattgagaga
ttaagaacttgggatagtagaagtcaagttcatgaaccagttgacagaaactttagacaa
gcatttagtgaattagatagactcaaagacaaattagcagtaggtgatgcagttattgaa
aaagcagcttacatttacagaaaagcattagagaaaggactagttagaggacgttccatt
tcagctttaattgcatcagcactttatgctgcatgtcgagacactgaaaccccaagaaca
ctaaaagatattggacaagcaagtaacatcaaaagaaaagacattgcaagatgttataga
ttattgttaagagaattaaatttgaagatgccagtagtagacccaatcaaatgtatttca
agaattgcaagcaaagctggtttatcagagaaaacaaaaagaaaagcaacaaagattttg
caaactgcagaagaaaataaaatttcagcaggtaaagacccaatgggattagcagctgct
gcactctatgttgcatgtgtaacaaatggagaaaataaaacacagcgagatgtagcagaa
gctgcaggagtcactgaagtgaccatcagaaacaggtacaaaggcctaaaagtagcatta
aacctctag
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