Nitrosopumilus maritimus: Nmar_0987
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Entry
Nmar_0987 CDS
T00626
Name
(GenBank) Transcription factor TFIIB cyclin-related
KO
K03124
transcription initiation factor TFIIB
Organism
nmr
Nitrosopumilus maritimus
Pathway
nmr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
nmr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
Nmar_0987
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmr03021
]
Nmar_0987
Transcription machinery [BR:
nmr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
Nmar_0987
Prokaryotic type
Archaeal type
TFB
Nmar_0987
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
BRF2-like_C_cyclin_rpt
Zn_ribbon_tTFIIB
Cas12f1-like_TNB
Lar_restr_allev
Zn_Ribbon_Prim
Ribosomal_S27e
Motif
Other DBs
NCBI-ProteinID:
ABX12883
UniProt:
A9A3F1
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All DBs
Position
863158..864105
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AA seq
315 aa
AA seq
DB search
MDNKAIAEIQVIMLRNQMVTGSKCPACGDKKMITDENTGELFCGKCGFVVSDKIADTGAE
WRSFSNDEGNKARTGAGTSLTMHDMGLSTVIGAANKDSTGKPLSASVKSSIERLRTWDSR
SQAHSSADRNLRQALNEMDKLKDKLALTDAVIEKAAYIYRKAMEKKLVRGRSIQGLVAAC
LYASCRNTETPRTLDDVAKGINIRRKDVARCYRLIFRELELKMPVVDPVKGVSRIASIAE
LSEKSKRKAIAILNEAKKMGVVAGKDPMGIAAAALYLACISTGEVKSQKDISIASGVTEV
TIRNRCAGLRKMIND
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggataataaggcaattgctgaaatccaagtaattatgcttagaaatcaaatggtcaca
ggatcaaaatgtccagcctgtggcgataagaaaatgattacagatgagaacaccggagaa
ttattttgtggaaaatgtggatttgtagtatcagataaaattgcagacacaggtgctgaa
tggcgttctttctcaaatgatgaaggaaacaaagccagaacaggtgcaggaacatcactt
acaatgcatgatatgggattatcaacagtaattggtgcagccaacaaagattcaacagga
aaaccactatctgcaagtgtcaaaagttcaattgaaagactacgaacttgggacagtaga
agtcaagcacattcttcagcagacagaaatctgagacaagcactcaatgaaatggacaaa
ctaaaagacaaacttgcattaactgatgcagtaattgaaaaagcagcttacatttacaga
aaagcaatggagaagaaactagtcagaggtcgttcaattcaaggattagttgcagcatgt
ctttatgcatcttgtagaaatacagaaactccaagaacactagatgatgttgcaaaagga
atcaacattagaagaaaagatgttgccagatgttatagattaattttcagagaactagaa
ctaaaaatgccagtagttgatcctgtaaaaggagtttcaagaattgcaagcattgcagag
cttagtgagaaaagtaaacgtaaagcaattgcaattcttaatgaagcaaagaagatggga
gtagtggcaggaaaagatccaatgggaatagctgctgcagcactttatcttgcatgtatc
agtacaggagaggtaaaatctcaaaaggacatatccatagcatctggagtaactgaggtt
actatcagaaacagatgtgcaggattaagaaagatgattaacgattaa
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