Nitrosopumilus maritimus: Nmar_1008
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Entry
Nmar_1008 CDS
T00626
Name
(GenBank) D-alanine--D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
nmr
Nitrosopumilus maritimus
Pathway
nmr00470
D-Amino acid metabolism
nmr01100
Metabolic pathways
nmr01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
nmr00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
Nmar_1008
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Nmar_1008
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
nmr01011
]
Nmar_1008
Enzymes [BR:
nmr01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
Nmar_1008
Peptidoglycan biosynthesis and degradation proteins [BR:
nmr01011
]
Precursor biosynthesis
Amino acid ligase
Nmar_1008
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Peptidase_M20
ATP-grasp_3
ATP-grasp_4
CPSase_L_D2
RimK
GARS_A
Motif
Other DBs
NCBI-ProteinID:
ABX12904
UniProt:
A9A3H2
LinkDB
All DBs
Position
complement(882881..885112)
Genome browser
AA seq
743 aa
AA seq
DB search
MDSQIPTKLKLNTIKKYCEYLMKVSLIYNEKKIDPNDVINVFGMTTKEHYSSKAVERVAR
ALEKGGHSVKVIEGDIHLADELREFMPKVVSGEKPGMVFNMAYGIQGQNRYTHVPAMMEM
LGIPYIGSGPAGHAIVQDKVMTKIVLQKNNIPTPGFWVFKTPDDKFDDLVFPVIVKPKLE
STSMGMEVVDNWDDLRNAVKVQIEKYQQDILVEQFISGREFAVGLIGNSPNIEVLPIVEI
NLGDPDKIQTISDKKKTGGVDKTCPAKLSKEKTEYMKKICIDAFTALGLNDYTRVDFRMD
KDENIYILELNSMASLGMGGSLFYAAKTAGYTYESLINKILDVATMRYFGSSQLPETEHE
PDLTQPLRIVARTYLRSHLQNQKDTLKDFVNLNTHVHNIDNVNKLGTMLSRRMKHLGFSE
HLHRQFEIGDFHYFKNHEDEKNDVLIISHMDTHYGPNDLISYFEDDDRIYGSGIAESKGG
LTVMLGALHALRFAKRLKKIKCGVLLTTDDSLGGRFSKKLVQQYSKKSKYVIGLKSASKD
GGIITTCYGRNDYQIRFTTPNSTSSDIHGIIPILGKKITAIEKLSKDEKNYRLRTTSVIA
QGTHGHAPNYATLSIVCSFKTPALGKTMDSKIRTIMQKKESGQKNLEVAINQIQTRPPVI
EEESDKKFYEQVEDLAKKHELKIRRHEQIMSSDISNVPSRLPALDGFGPVGHKYRSTQEY
ILHDSITERSALLASVLYRCSGN
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atggattctcaaatcccaaccaaattaaaattaaatacaatcaaaaaatattgtgaatat
ctcatgaaagtatcactaatctataatgaaaagaagatagatccaaatgatgtcatcaat
gtttttggaatgacaacaaaagagcattacagctcaaaagctgttgaaagagttgcaaga
gcattagagaaaggaggtcattctgtcaaagttattgaaggtgatatccatcttgctgat
gaattacgtgagtttatgcccaaagtagtttcaggcgaaaagccagggatggttttcaat
atggcatatggaattcaagggcaaaataggtacacacatgttccagccatgatggagatg
cttgggattccttacattggctctggtcctgcaggtcatgcaattgtacaagataaggtg
atgaccaaaattgttcttcaaaaaaataatatcccaacccctggtttttgggtattcaag
acaccagacgataaatttgatgatctagttttccccgtaattgtaaaaccaaaactagaa
tcaacttctatgggaatggaagtagttgataattgggatgatttgcgaaatgctgtcaaa
gttcagattgaaaaatatcaacaagacattctagtagaacaatttatctctggacgagag
tttgcagtaggattaattgggaacagtccaaacattgaggttcttccaatcgttgaaatt
aatcttggagatcctgacaaaattcaaacaatttcagataaaaagaaaacaggtggtgtt
gataaaacatgtcctgcaaaattatccaaagaaaaaacagaatatatgaaaaagatttgc
attgatgcattcacagctttgggtcttaatgactatactagagttgactttagaatggat
aaagatgagaatatctacattctagaactaaattccatggcgagtttgggaatgggtggt
tctttgttttatgccgcaaaaacagctggatacacttacgaatctttaatcaataaaatt
ttagacgttgcaaccatgagatattttggttcgtctcaattgcctgaaactgaacatgaa
cctgaccttacacaaccactgcggattgttgcacgcacttatctgagaagtcacctacaa
aaccaaaaagacactttgaaagattttgttaacttgaatacgcatgtacataacatcgat
aatgtaaacaaattaggcacaatgttgtctaggaggatgaaacacttgggcttctctgag
catttgcacaggcagtttgagattggagattttcattattttaagaaccatgaggatgag
aaaaacgatgttctgataatatctcatatggatactcattatggtccaaatgatttaatc
tcgtattttgaagatgatgataggatttacggttcaggaatagctgaaagtaagggcggt
ctaactgtaatgctgggtgcattgcatgctttacgctttgcaaaacgtctaaagaaaata
aaatgtggtgtcttgcttacaaccgatgatagtctaggcggacgttttagtaaaaaactt
gtccaacaatattctaaaaaatcaaagtatgttataggattaaaatctgcaagcaaagat
ggaggtataattactacttgttatggaagaaatgactatcaaattcgattcaccactcct
aattccacatcctctgatattcatggaataattcctatacttggtaaaaagattacagca
attgaaaaactttcaaaagatgaaaaaaattatcgtctgagaacaacatctgttatagct
caaggcactcatggccatgcgccaaattatgcaacgttatctatagtttgtagttttaaa
actcctgcattaggtaaaacaatggattctaaaattcgaactattatgcaaaaaaaagaa
tccggacaaaaaaatttggaagttgcaattaatcaaatacaaacaagacctccagtcatt
gaagaagaatctgataaaaaattctacgagcaagtagaagatttggctaaaaaacatgaa
ttaaaaataagacgccatgaacagataatgtcctcagatattagtaatgtgccttcaaga
ttgcctgcactagatgggtttggtcctgttggtcacaaatatcgctctacacaagaatac
atacttcatgatagcatcacagaacgttctgctctgcttgcatctgtgttgtataggtgt
agtggaaattga
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