Nitrosopumilus maritimus: Nmar_1056
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Entry
Nmar_1056 CDS
T00626
Name
(GenBank) phage SPO1 DNA polymerase-related protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
nmr
Nitrosopumilus maritimus
Pathway
nmr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Nmar_1056
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nmr03400
]
Nmar_1056
Enzymes [BR:
nmr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
Nmar_1056
DNA repair and recombination proteins [BR:
nmr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Nmar_1056
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
SSV1_D-63
Epimerase_2
Motif
Other DBs
NCBI-ProteinID:
ABX12952
UniProt:
A9A4H4
LinkDB
All DBs
Position
931785..932375
Genome browser
AA seq
196 aa
AA seq
DB search
MNQLETIKQNVIKCTKCDLYKTRTNSVPGKGNFQSDVIFVGEAPGRNEDKNGEPFVGAAG
KKLSAALEGAGVSREDVYITNVVKCRPPNNRVPNTNERDTCKEYLKNEILIIKPKIICVL
GNTAFNSVLGGSEITKFRGKLVRKDNQLYFLTIHPAATIYNQELISTLNEDIKKLFNLIT
ELKNNKIVSIDIEYTS
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgaaccagttagagacaataaaacagaatgtgattaaatgtacaaaatgtgatttgtat
aaaacaagaacaaattcagttccaggtaaaggtaattttcaatcagacgtgatatttgtt
ggggaggcacctggaagaaacgaggataagaatggagagccatttgtaggtgcagcagga
aagaaactttctgcagcattagaaggggcaggagtttctagagaggatgtatacattacc
aatgttgtaaaatgtagacctccaaacaacagagtaccaaatacgaacgaaagagacacg
tgtaaagagtatctaaaaaatgaaattttaataatcaaaccaaaaattatttgtgtttta
ggaaatacagcatttaattcagttctaggcggttcagagattacaaaattcagaggaaaa
ttagtgagaaaagataaccaattgtattttttgacaattcatcctgctgcaacaatatac
aatcaagaattaatctccacattaaatgaagatattaaaaaactctttaatttaatcaca
gagttaaaaaacaacaaaatagtttcaattgatattgaatacacttcctag
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