Nitrosopumilus maritimus: Nmar_1104
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Entry
Nmar_1104 CDS
T00626
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
nmr
Nitrosopumilus maritimus
Pathway
nmr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Nmar_1104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nmr03400
]
Nmar_1104
DNA repair and recombination proteins [BR:
nmr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Nmar_1104
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Nmar_1104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_16
nSTAND3
AAA_21
RsgA_GTPase
AAA_23
AAA_22
AAA_25
AAA_14
nSTAND1
NB-ARC
NACHT
AAA_33
Viral_helicase1
DnaJ_CXXCXGXG
cobW
ATPase_2
MMR_HSR1
MeaB
Septin
HUTI_composite_bact
Motif
Other DBs
NCBI-ProteinID:
ABX13000
UniProt:
A9A4M2
LinkDB
All DBs
Position
complement(1006999..1009818)
Genome browser
AA seq
939 aa
AA seq
DB search
MTENKLKIRGARHHNLKNIDIDIPKNKLVVISGLSGSGKSTLAFDTIYAEGQRRYVESLS
AYARQFLEMMDKPDVDSIDGLSPAISIQQKTTSKNPRSTVGTTTEIYDYMRLLYARIGIP
YCTNCGRKISTQSIETICDSVLREFSGKKILILSPIIQRKKGTYEKLFEQIKKDGYSRIR
LNGEILSLDEEIPPLDRQKWHNIEIVVDRITTEKSERSRLFEAIQTAIKASKGDVMVASE
KSEKVFSQNNACPYCGLTVGELEPRNFSFNSPFGLCKDCNGLGVKMEFDPDLVIPDKTKS
ILDGAIVPWSGRFSSFRRQALRAVGKKFGFDLMTPINKIKPKHLKIILYGTDDLIDFNYR
SKSGDSSWQYTNAFEGVLDNLQRVFMETDSESKREWLKQFMRDTPCNGCNGKKLKPESLA
VKINDKGIMDVCDLSIDHCYDFFSTLKLTENEQYIARDVLKEIKERLEFLMNVGLNYLTL
NRLSSTLSGGESQRIRLATQIGSNLTGVLYVLDEPTIGLHQRDNARLIKTLNKLRNLGNT
VIVVEHDEEVIRNSDWMVDLGPGAGVNGGSVVFEGTVNQILNGHKSVTGDYLKDNSLIML
QDKIRNNSGTLVVEKASENNLKDIDVEIPLGLFVSITGVSGSGKSTLINDILLKALENHF
YKSNVKPGTHKKIVGLENIDKVIAIDQSPIGRTPRSNPATYIGAFTPIRELYANTELSKE
RGYAPGQFSFNVADGRCFACDGDGVKQIEMQFLSDVYVKCDECKGKRYNSETLSVLYKGK
NISDVLDMTVYEALNFFENIPAIKRKLQTIYDVGLGYIKLGQSSTTLSGGEAQRVKLASE
LSKRGTGKTMYILDEPTTGLHFADVQKLLDVLNRLANLGNTVVVIEHNMDVIKNSDWIID
LGPEGGDEGGRIVATGTPKDIAKAPGSYTGKYLKKLVKK
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaaataaattaaaaattcgtggtgcacgtcatcataatttaaaaaacattgac
attgacattccaaaaaacaaactagttgtaattagtggactgtctggatctggtaaatca
actttagcatttgatacaatatatgctgaaggacaaagacgatatgttgaatccctttca
gcatatgctcgtcagttcttggagatgatggacaaacctgatgttgactctatagatgga
ttatctcctgcaatttcaatccaacaaaaaacaactagtaaaaaccctcgttctactgtt
ggaacaaccactgaaatttatgattacatgagattactttatgctagaattggtattcca
tattgtactaattgtggcagaaaaatctctacccaatcaattgaaaccatttgtgattct
gtgctaagagaattttctggcaaaaagattctgatactgtctcctatcatccagcgaaag
aaaggaacctatgagaaactctttgagcagatcaaaaaggacggttactctagaatacgc
ctaaatggagaaattttgagcctagatgaggaaattcctccacttgacaggcaaaaatgg
cacaatattgagattgtagttgacagaataactactgaaaaatctgaacgctcaagattg
tttgaggctattcagactgcaataaaggcatcaaaaggagatgtaatggttgcatcagaa
aaatctgaaaaagtcttttctcaaaataatgcttgtccttattgtggattaacagtaggt
gaattggaaccaagaaatttttcattcaactctccatttggcttgtgtaaagattgcaat
ggccttggtgttaaaatggagtttgatcctgatttagtaattccagataaaacaaaatca
attttggatggagcaattgttccttggagtggaagattttcttcctttagaagacaagca
ttaagagcagtaggcaaaaaatttggctttgatttgatgacaccaattaacaaaataaaa
ccaaaacatctcaaaattattttgtatggaacagatgatctaattgattttaattatcgt
tcaaaatctggcgattcttcatggcaatacactaatgcctttgaaggtgtgttggataat
cttcaacgtgtttttatggaaactgattctgaatcaaaacgtgaatggttaaaacaattc
atgagagatactccctgtaatggatgtaatggaaaaaaactcaaacctgaatcacttgca
gtaaaaatcaatgataagggaatcatggatgtctgtgatttgtctattgaccattgttat
gatttcttttctacgctaaaactaactgaaaatgaacaatacattgcaagagatgttcta
aaggaaattaaagaacgactagagtttttgatgaatgttggtttgaattatcttactcta
aacagattaagttctacattatctggtggcgaatctcaaagaattcgattagctacacaa
attggttccaatcttactggtgttttgtatgtgttagatgaaccaactatcggtcttcac
caaagagataatgcccgactcattaaaacgctaaataagctacgaaatttgggaaatact
gttattgtagtggagcatgacgaagaagttatacgaaattcagactggatggttgatttg
ggacctggagccggtgtaaatggtggtagtgttgtttttgaaggaactgtcaaccaaatt
ctcaatggtcacaaatctgtaactggtgattatcttaaagataattctttaatcatgttg
caagacaaaattcgaaataattctggaacacttgttgtagaaaaggcatctgaaaacaat
ctcaaagatattgatgttgaaattccattaggactttttgtttctattactggtgtttcg
ggctctggaaaatctactctgattaatgacattttactaaaagcattagaaaatcatttt
tacaaatctaatgtcaaacctggaactcacaaaaagattgttggtttagagaatatagac
aaagtcattgcaattgatcaatctccaattggacgaacacctcgttcaaatccagcaaca
tacattggtgcatttactcccattagagaattgtatgcaaatactgaactatcaaaagaa
cgtggatatgctccaggacaattttcatttaatgttgcagatggaagatgttttgcatgt
gatggtgatggtgtaaaacaaatcgagatgcagtttctttctgatgtgtatgtaaaatgt
gatgaatgtaaaggaaaacgttacaactctgaaacattgtctgttctttacaaagggaaa
aacatctcagatgttttggatatgactgtgtatgaagctctaaacttttttgaaaacatt
cctgcaattaaacgaaaattacaaacaatttacgatgttggtttgggatatatcaaatta
ggccaatcttctacaactctatctggtggtgaggctcaaagagtgaaactagcctcagaa
ttatcaaaacgaggaactggaaagaccatgtacatcttagatgagcctacaactggtctc
cactttgctgatgtacaaaaattactggatgtcttaaacagactggccaatcttggaaat
actgttgtagtaattgaacacaatatggacgtcatcaaaaactctgattggataattgat
ttgggtcctgaaggtggagatgagggtggcagaattgttgccacaggaaccccaaaagac
attgcaaaagctcctggaagctatactggaaaatatctaaagaaattagttaaaaaatga
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