Nitrosopumilus maritimus: Nmar_1105
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Entry
Nmar_1105 CDS
T00626
Name
(GenBank) excinuclease ABC, B subunit
KO
K03702
excinuclease ABC subunit B
Organism
nmr
Nitrosopumilus maritimus
Pathway
nmr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
nmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Nmar_1105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nmr03400
]
Nmar_1105
DNA repair and recombination proteins [BR:
nmr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Nmar_1105
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Nmar_1105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
UVR
ResIII
DEAD
Met_synt_B12
AAA_30
UB2H
HEM4
Tup_N
Motif
Other DBs
NCBI-ProteinID:
ABX13001
UniProt:
A9A4M3
LinkDB
All DBs
Position
complement(1009805..1011757)
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AA seq
650 aa
AA seq
DB search
MEQITQFELASEYAPTGDQPQAIDQLVKGVKDKTVQTLLGVTGSGKTFSVANVIARTGKN
TLVISHNKTLAAQLYSELKQFFPKNNVGYFVSYYDYYQPESYLPQTDTYIEKDTQVNEKI
EKLRLEATAMLLSGEPTIIVSTVSCIYSLGNPQDWEDLAITVTAGDEIKRNELIRQLIDA
RYERNDTEVAPGNFRVKGDTIDITPAYSEDLVRISMFGDEVEKISVLDHVSLKEKKKINQ
MKIFPAKHYLIAKDVRKKAVQSIKDELKKRLPELNELEKQRLEMRTKYDLEMIEELGYCS
GIENYSRHFDGRKAGQKAFCLMDFFGDDYLLVIDESHVTLPQLHGMYKGDHSRKKELVTY
GFRLPSAYDNRPLKFEEFEEYVRNTIFVSATPADYEKKISSQIAEQLVRPTGLLDPEVEI
RPTKNQMDDLIEEINKKVANSERVLVTTLTKRMAEDLAEYLSKKQVRVRYMHSEIEGLQR
TELIRQLRLGEFDVLVGINLLREGLDIPEVSLVAILDADKEGFLRNFTSLIQTFGRAARN
ENGNVIMYADTVTQSMKNAMNETKRRREKQMKYNKDNNITPKTIIKSVPEQVTTLDDSKL
KSTHDIATDIIDLEAQMKKYSEDLDFERAIECRDRIKRLEKEIQIKNDRK
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
ttggaacagataactcaatttgaattagcatctgaatatgcccctacaggtgaccagcct
caagcaattgatcaactcgtcaagggtgtcaaagataaaaccgttcaaaccttgttgggt
gtaactggtagcggtaagacattttctgttgcaaatgttattgcaagaactggcaaaaac
actctagtcatttctcataacaaaactcttgcagcccaactgtattcagaattaaaacaa
tttttcccaaaaaacaatgttggatattttgtttcatactatgactattatcagcctgaa
agttatcttcctcaaactgatacttacattgaaaaagacactcaagtcaatgaaaaaatt
gaaaagctacgactagaggcaactgcaatgttgctttcaggtgaacctacaataatcgtc
tcaactgtttcttgcatctactctcttggaaatccacaagattgggaagacttggcaatt
acagtaactgctggtgatgaaattaaacgaaatgaattgattcggcaattaattgatgca
agatatgagcgaaatgatactgaagttgctcctggaaactttagagtaaagggtgatacc
attgacattactcctgcatactctgaagatcttgttagaatctctatgtttggtgatgaa
gttgaaaagatatctgtacttgatcatgtttcattaaaagaaaaaaagaagattaatcaa
atgaaaatttttcctgcaaaacactatcttattgcaaaagatgttagaaaaaaagcagtc
caatcaattaaagatgaactcaagaaacgtttgcctgaattaaatgaattagaaaaacag
agactagagatgagaacaaaatacgatttagaaatgattgaagaattgggatattgttct
ggtattgaaaactattctagacattttgatggacgaaaagctggtcaaaaggcattttgt
ttgatggatttctttggagatgactatctattggtaattgatgaatctcatgttacattg
ccacaactacatggaatgtacaaaggtgatcattcgcgaaaaaaagaacttgtgacatat
ggatttaggttgccaagtgcatatgataaccgtccactaaaatttgaagaatttgaagaa
tatgttcgaaacaccatatttgtgtctgcaactcctgctgattatgaaaagaaaatctcc
tctcaaattgccgaacaattggtccgccccacaggactattagatcctgaagttgagatt
aggcctaccaaaaaccagatggatgatctaattgaggaaatcaacaaaaaagtagccaat
tctgaacgtgttttggtaactactctgactaaaagaatggctgaagatttggctgaatat
ctctcaaaaaaacaagtcagagtacgatatatgcactctgaaattgaagggctgcaaaga
acagaactaatcagacaactacggctaggtgagtttgatgttctagttggaattaatctg
cttagggaggggttggatattcctgaagtttctctagttgcaatattggatgcagacaaa
gaagggttcttgagaaattttaccagtttgattcaaacatttggcagggctgcaagaaac
gaaaatggaaatgtaatcatgtatgctgatactgttactcaatcgatgaaaaatgctatg
aatgaaacaaaacgtcgtagagaaaaacaaatgaaatacaacaaagataacaacattact
ccaaagacaatcataaaatctgttccagaacaagtcacaacacttgatgactctaaacta
aaatcaacacatgacattgcaactgatattattgatttagaagcccaaatgaaaaaatat
tctgaagacttggattttgaacgtgcaattgaatgcagagatagaataaaaagactagaa
aaggagattcaaattaaaaatgaccgaaaataa
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