Nitrosopumilus maritimus: Nmar_1509
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Entry
Nmar_1509 CDS
T00626
Name
(GenBank) phosphoesterase DHHA1
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
nmr
Nitrosopumilus maritimus
Pathway
nmr03410
Base excision repair
nmr03430
Mismatch repair
nmr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Nmar_1509
03430 Mismatch repair
Nmar_1509
03440 Homologous recombination
Nmar_1509
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nmr03400
]
Nmar_1509
DNA repair and recombination proteins [BR:
nmr03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
Nmar_1509
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Nmar_1509
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Nmar_1509
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
Motif
Other DBs
NCBI-ProteinID:
ABX13405
UniProt:
A9A4V1
LinkDB
All DBs
Position
1372252..1373673
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AA seq
473 aa
AA seq
DB search
MTKSLDESLSFFKDKVTDCIRSKKSIFVTTHIDCDGLTSGSIITKALIRAGANCTVRTSK
EFSKNVVDSFKTDSRDFHIVTDLGGGFGKDLNETLGDNWIVLDHHQIPDEEIENPNVINA
WKYGIDGGLEICAGGMAYLASMALDEKNSDLSSIAVVSALGDRQDQGERKSFTGKNFEIA
NTAKEQGLVEIDLDLLLVGRETRPLPDALAFTSQPFIEGLTWNRDACLSLLNSSGIQLKD
EGRWRVPAELDEEEKRQVIESITKFTAGKNATEIMSELIGYTYTFPREDKRSFLRDGREF
STMLNSCGRINRSGVGMAICMGDRNKILREGETILTDYRKMIREYMNILSNERWRISESE
TCVMVNGEDIVPETMTGTISSLIAGSPKNSGKIVILRTKGEENTIKFSSRKSFGCKSDIN
LSDLMRAGAEKFDGIGGGHDAAAGAKITKDKLDEFLNYLEVNVVNVSSADSPQ
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatcacttgatgagtcactttcgtttttcaaagataaagttacagattgcata
agatctaaaaaatcaatttttgttacaacccacattgattgtgacgggttgacatctgga
agtatcattaccaaagctctgataagagctggggcaaattgtactgttaggacatcaaaa
gaatttagcaaaaatgttgtagactctttcaaaacagattctagagattttcacatagtt
actgatcttggaggaggttttggaaaggacctcaatgagacacttggagataactggatt
gtcttggatcatcaccaaatcccagatgaggagatagagaatccaaatgtgattaatgca
tggaagtatggaatcgatggaggccttgaaatttgtgccggcggaatggcatatctagca
tccatggcacttgatgagaaaaactctgacttgtcatcaattgcagtagtatctgctctt
ggagacagacaggaccaaggagaaagaaagtcatttactggaaagaattttgaaatcgca
aacactgcaaaagaacaaggactagttgagattgacttggacctattattggttggaaga
gagacaagaccacttccagatgccttggcatttacatcccagccatttattgagggactt
acctggaacagagatgcctgcctttcactactaaattcatcaggaatccagcttaaagac
gagggcagatggagggttccagcagagctagacgaggaagaaaaaagacaggtaatcgag
tcaatcaccaaatttacagctggcaaaaatgccacagagataatgtctgaattaatcgga
tacacttacacatttcctagagaagacaagaggagtttcttgagggatggtagagagttt
tcaactatgctaaactcttgtggaagaataaaccgctccggagtcggaatggcaatctgc
atgggagacagaaacaagattctaagagaaggggagacaatcctgacagactatagaaag
atgatcagagaatacatgaacattctatcaaatgagagatggaggatttctgaaagtgag
acatgtgttatggtaaatggagaagacattgtccctgaaacaatgactggaaccatctca
tcactaattgcaggctctccaaagaattctggtaaaattgtaattctcagaacaaaggga
gaagagaacactatcaagttttcatcaagaaagtcatttggttgcaaatcagacatcaac
ctaagtgatctgatgagagctggtgctgagaagtttgatggtattggaggaggtcatgat
gcagcagctggagcaaaaataactaaagacaaattagatgagtttctcaattatttagaa
gtaaatgtcgttaacgtgtcaagtgcagatagtcctcagtaa
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