Nitrosopumilus maritimus: Nmar_1540
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Entry
Nmar_1540 CDS
T00626
Name
(GenBank) HhH-GPD family protein
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
nmr
Nitrosopumilus maritimus
Pathway
nmr03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
nmr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Nmar_1540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nmr03400
]
Nmar_1540
Enzymes [BR:
nmr01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
Nmar_1540
DNA repair and recombination proteins [BR:
nmr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Nmar_1540
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
ILEI
TraH
Motif
Other DBs
NCBI-ProteinID:
ABX13436
UniProt:
A9A4Y2
LinkDB
All DBs
Position
1402714..1403577
Genome browser
AA seq
287 aa
AA seq
DB search
MKRFQSKMQIKQPIDVENSINSGQVFLWRKNKEFWYGVNGQDILEVNKNGKIKSLQNYKT
DFFRNNDNFDEIIKSISKDKIVKNAVKKYPGLRIIKQDPFQCLISFIVSSNSNIQKIKTN
LENISQKFGERVEYKDQEFFLFPNAKTLSKASITEIKNCGVGYRAKFIKEASKIFASEKI
MIDDLKSSDYFDAKKKIRIIPGIGNKVADCILLFSLDKLESFPLDRWMIRILEKYYSKKF
QIDTKTITEKQYDILHEKIVDYFGLYAGYAQQFLFKMERENYQKKWL
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgaagagattccaatctaaaatgcaaataaagcaaccaatagatgttgaaaattcaata
aacagcggtcaagtttttctttggagaaagaataaagaattttggtacggagtaaacgga
caagacatactagaagtaaacaaaaatggaaaaataaagtcattacaaaattacaaaaca
gatttttttagaaataatgataattttgatgaaattatcaaatcgatttcaaaagacaag
atagtaaaaaatgctgtaaaaaaatatccagggcttagaatcataaaacaagatccattc
caatgtttgatttcatttatcgtatcatcaaactctaacatccaaaaaattaaaacaaat
ctagaaaacatatcacaaaaatttggagaaagagtggaatacaaagatcaagagtttttt
ttatttcctaatgcaaaaacgctttccaaagcatcaataactgaaattaaaaattgtgga
gttggatatcgtgcaaaattcatcaaagaagcctcaaaaatttttgcttctgaaaaaatt
atgattgatgatttgaaatcaagtgattattttgatgcaaaaaagaagattcgcatcatt
ccaggcataggaaacaaagttgcagattgtattttattattttctcttgataagttagaa
tcatttccattagatagatggatgattagaattttagagaaatattattcaaaaaaattt
caaatagataccaaaacaattacagaaaaacaatatgatattctacatgaaaagattgta
gattattttgggctatatgcaggatatgcacaacagtttctcttcaaaatggaaagagaa
aattatcaaaaaaagtggctgtaa
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