Nitrosopumilus maritimus: Nmar_1781
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Entry
Nmar_1781 CDS
T00626
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
nmr
Nitrosopumilus maritimus
Brite
KEGG Orthology (KO) [BR:
nmr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nmr03016
]
Nmar_1781
Enzymes [BR:
nmr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Nmar_1781
Transfer RNA biogenesis [BR:
nmr03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Nmar_1781
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
AKAP7_NLS
2_5_RNA_ligase2
Acb1
CdvA
Motif
Other DBs
NCBI-ProteinID:
ABX13677
UniProt:
A9A3X7
LinkDB
All DBs
Position
1627930..1628472
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AA seq
180 aa
AA seq
DB search
MRTFVAIEISENDIKKSIKDFQNKLQINAKPINSDQLHFTLQFLGEISEEQVQKVIESLQ
TIKFSEFTINLKGIGAFPKPKFPRVIWIGTDEEGGKNLIELAKKVENVLKPLGLVSDKPF
KPHITIFRIKKKIGDMTEELNKQKFMDFGMQKISRIMLKKSELTSDGPIYSNLEEVIAVK
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgcgaacttttgtggcaattgagatttcagaaaatgacataaaaaaatctattaaagat
tttcaaaataaattacaaattaatgcaaagccaataaattcagatcaattacattttaca
ttacaatttttgggagaaatttctgaagaacaagtgcaaaaagtaattgaatcactacaa
acaatcaagttttctgaatttaccataaacttgaaaggaataggagcatttcccaaacca
aaatttccacgagtgatttggattggaacagatgaagaaggagggaaaaatctgattgaa
ttggcaaaaaaagtggaaaatgtgcttaaacctctaggattagtttctgataaaccattc
aagccacacattacaatatttagaattaaaaagaagattggagatatgacagaggaattg
aataaacaaaagtttatggattttggaatgcaaaaaatttctaggattatgctgaaaaaa
agtgaacttacatctgatggaccaatctattctaatttagaggaggtaattgctgtaaaa
tga
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