Neisseria meningitidis M01-240355 (serogroup B): NMBM01240355_0201
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Entry
NMBM01240355_0201 CDS
T01947
Name
(GenBank) ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
nms
Neisseria meningitidis M01-240355 (serogroup B)
Pathway
nms03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nms00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NMBM01240355_0201
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nms03019
]
NMBM01240355_0201
03009 Ribosome biogenesis [BR:
nms03009
]
NMBM01240355_0201
Enzymes [BR:
nms01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
NMBM01240355_0201
Messenger RNA biogenesis [BR:
nms03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NMBM01240355_0201
Ribosome biogenesis [BR:
nms03009
]
Prokaryotic type
rRNA processing factors
NMBM01240355_0201
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Zn_ribbon_InsA
Motif
Other DBs
NCBI-ProteinID:
ADY98771
LinkDB
All DBs
Position
complement(202106..204865)
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AA seq
919 aa
AA seq
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MKRMLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKGIITRIEPSLEACFVDY
GTDRHGFLPFKEVSRSYFQDYEGGRARIQDVLKEGMEVIVQVEKDERGNKGAALTTFISL
AGRYLVLMPNNPRGGGVSRRIEGEERQELKAAMAELDIPNGMSIIARTAGIGRSAEELEW
DLNYLKQLWQAIEEAGKAHHDPYLLFMESSLLIRAIRDYFRPDIGEILVDNQEVYDQVAE
FMSYVMPGNIGRLKLYEDHTPLFSRFQIEHQIESAFSRSVSLPSGGAIVIDHTEALVSID
VNSARATRGADIEDTAFKTNMEAAEEVARQMRLRDLGGLVVIDFIDMENPKHQRDVENVL
RDALKKDRARVQMGKLSRFGLLELSRQRLKPALGESSHVACPRCAGTGVIRGIESTALHV
LRIIQEEAMKDNTGEVRAQVPVDVATFLLNEKRAELFAMEERLDVNVVLIPNIHLENPHY
EINRIRTDDVEEDGEPSYKRVAEPEEDESAKPFGGEKAKAARPEPAVKGVRHTSPAPTAA
PEKKTSWWDSFKAWLKRIFGGSETQAAPAAETSEKRSTANRSGSRANNRRQNPRRSKREG
SKVEVREVAGKTAGQEARADKAETRNNGNRRRNERGDRAAERANEAEIQDRNIQPAATVA
DAAPSETEVQTGKRRRNGSRSERGQTAPETAAVAETTVQTAENTPSEPHTAEDKGSKPKS
ERNRRERDSRDAKERRERNNQRDRRQNGKKRNIPSAAKIEQYLNIHDTADKVRSAAAHVF
GETDANAPITVSIAEPVAERDVPTASPAVPNNDAPVYDAAEKIRQVVAAILPEGAAPEAA
AQEMPSETATFTAAAEQARETAQTGGLVLIETDPAALKAWAAQPEVQAGRGLRRSEQPKP
SEVATVPTEEMIQVETRQG
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgttattcaacgcaacgcaggccgaagagctacgcgttgccatcgtcgac
ggacaaaacctgctggatttggacatcgaaacgctgggcaaagaacagcgcaaaggcaat
atctacaaaggcatcattacccgcatcgagccgtcgctggaagcgtgtttcgtcgattac
ggaaccgaccgccacggctttttgccgtttaaagaagtctcccgctcatacttccaagac
tacgaaggcggacgcgcgcgcatccaagacgtgctcaaagaaggcatggaagtcatcgtc
caagtcgaaaaagacgagcgcggcaacaaaggcgcggcactgaccaccttcatcagcctc
gccggacgctatctggtattgatgccgaacaacccgcgcggcggcggcgtatcccgccgt
atcgaaggcgaagagcgtcaagaactcaaagccgccatggcggaactcgacattccaaac
ggcatgagcattattgcccgcaccgcaggcatcggccgcagcgcggaagagttggaatgg
gatttgaactacctcaaacaactctggcaggcgattgaagaagcaggaaaggcgcatcat
gacccctacctgctctttatggaaagctcgctgctcatccgcgccatccgcgactatttc
cgccccgacatcggcgagattttggtggacaatcaagaagtttacgaccaagttgccgag
ttcatgagctacgtcatgccgggcaatataggccgtctgaaactctacgaagaccacacg
ccgctgttttcccgcttccaaatcgaacatcaaatcgaaagcgcgttttcgcgcagcgtc
agcctgccttccggcggcgcgatcgtgatcgaccacaccgaagccctcgtttccatcgac
gtgaactccgcacgcgccacacgcggcgcggacatcgaagacaccgcgttcaaaaccaat
atggaagccgccgaagaagtcgcccgacaaatgcgcctgcgcgacttgggcggtttggtc
gtcatcgacttcatcgatatggaaaaccccaaacaccagcgcgatgtggaaaacgtcctg
cgcgacgcgctcaaaaaagaccgcgcccgcgtgcagatgggcaaactgtcccgtttcgga
cttttagaattgagccgccaacgtttgaaaccggctttgggcgaaagcagccatgttgcg
tgtccgcgctgtgccggcaccggcgtgattcggggcatcgaatccaccgccctgcacgtt
ttgcgcatcattcaagaagaagcaatgaaagacaacaccggcgaagtgcgcgcacaagtg
cccgtcgatgtcgccaccttcctgctgaacgaaaaacgcgccgagctgtttgcgatggaa
gagcgtttggatgtcaacgtcgtcctgattccgaacatccacctcgaaaatccgcactac
gaaatcaaccgcatccgcaccgacgacgtagaagaagacggcgaaccgagctacaagcgc
gttgccgagccagaagaagacgaatccgccaaaccgttcggcggcgaaaaagccaaagcc
gcccgtcccgaacccgccgtcaaaggcgtgcgccacaccagccccgccccgactgccgcc
cccgagaaaaaaacctcctggtgggacagcttcaaagcttggctcaaacgcattttcggc
ggcagcgaaacccaagccgcgcccgctgccgaaacctccgaaaaacgcagcacggcaaac
cgcagcggcagccgcgccaacaaccgccgccaaaacccgcgccgcagcaaacgcgaaggc
agcaaagtggaagtccgcgaagtggcaggcaaaactgccggacaggaagcgcgtgccgac
aaagccgaaacgcgcaacaacggcaaccgccgccgcaacgaacgcggcgaccgtgccgcc
gaacgcgccaacgaagcggaaatccaagaccgcaacatacagcctgccgcaaccgttgca
gatgccgcaccgtccgaaaccgaagtgcaaaccggaaaacgccgccgcaacggcagccgc
agcgaacgcggccaaaccgcgccggaaaccgccgccgttgccgaaacaaccgttcagaca
gcggaaaacacgccgtccgaaccgcataccgcagaagacaaaggcagcaagcccaaatcc
gaacgcaaccgccgcgaacgcgacagccgagatgccaaagaacgccgcgagcgcaacaat
cagcgcgaccgccgtcaaaacggcaaaaaacgcaatattccgtctgccgccaaaatcgag
cagtacctgaatattcacgacaccgccgacaaagtccgttccgccgccgcacacgttttc
ggcgaaaccgacgcaaacgcgcccatcaccgtcagcattgccgaaccggttgcagaaagg
gacgttccgacagcatctcccgccgttccaaacaacgacgcaccggtttatgatgcggca
gaaaaaatccgtcaggtcgttgccgccatcctgcccgaaggcgcggcaccggaagccgcg
gcacaggaaatgccgtctgaaaccgcaacctttacggctgcggcggaacaggcacgggaa
accgcacaaaccggcggactcgtcctgatcgaaaccgaccctgccgcattgaaggcatgg
gcggcacaacccgaagtccaagccggacgcggtttgcgccgttccgaacagcccaagccg
tctgaagtcgcaaccgtcccaaccgaagaaatgatccaagtcgaaacccggcaaggctga
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