Neisseria meningitidis M01-240355 (serogroup B): NMBM01240355_1939
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Entry
NMBM01240355_1939 CDS
T01947
Name
(GenBank) ATP-dependent RNA helicase hrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
nms
Neisseria meningitidis M01-240355 (serogroup B)
Brite
KEGG Orthology (KO) [BR:
nms00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nms03019
]
NMBM01240355_1939
Enzymes [BR:
nms01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NMBM01240355_1939
Messenger RNA biogenesis [BR:
nms03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NMBM01240355_1939
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
HA2_C
HA2_N
TraI_middle
zf_C2H2_ZNF598
Motif
Other DBs
NCBI-ProteinID:
ADZ00413
LinkDB
All DBs
Position
2136361..2139486
Genome browser
AA seq
1041 aa
AA seq
DB search
MQNMKNQVRGSGMDARSNPANVSDGLQNSSGHIGTNTRYRLTKLGEQMARLPIDPKIARI
LLAAKKHDCMAEILVIASALSIQDPRERPLEARDAAAKAHERFTDKQSDFLAYLNIWDSF
QRERDKGLSNKQLVQWCRQYFLSHLRMREWRELHHQLAQTAIEMGLTTKEAAFRRPPEIR
QLTSSENQGDQDLSAKLKQKQLDKKQHRAQIRAAKEAGYEQIHRALLTGLIANVGMKSPD
GNDYTGARGSRFHLFPASALFKAKPKWVMAAELVETTRLYARDVAAIQPEWIEQEAPHLV
RYHYFEPHWEQKRGEVVAGERVTLYGLTVLPRRPVSYGKVAPEEAREIFIRSALVAQECD
LKADFFVHNKKLIKEITELEHKSRKQDVLVDDEALFAFYHERLPDFYTADAVSDGLRPAN
PQQTAPSPVGEGRGEGKTVASQTNFSATTANPLPNPLPQEREQSAAASTFSDDLRPANLQ
QTAPSPVGEGRGEGKTVASQTNFSATTANPLPNPLPQEGEQSAAASAVSNDPQPQKQPAP
QKDRLKPLPLADIRTFQAWLKTAERENPRLLFLSRDDLMQHAAAHITEEQFPKFWQTADG
KFKLSYRFEPHHPLDGVTMTVPLTVLNRLHAPSLEWLVPGMLREKIQLLIKALPKQIRRI
CVPVPDFITKFLENNPDRQAAIIPQLAHFIAKSASDMRILEQIDQDAWAAQDLPEHCYLN
LRIIDDGGQELAGGRKLHELQQQLGKAAATTFRDNTQEFERDNVTTWDIGILPESIKFAR
GKQQLTGYLGLQKEKDGRIALRLFDTTEAAEQAHRQGVIELMKLQLKEQVKDLNKGIQGF
TQAAMLLKHINADTLRDDLTQAVCDRAFIGEDELPRNEKAFKEQIKRARSRLPAVKEALS
RYLQETAAAYAELNGKLGKHPLTHLLRLRLQTLLAAGFATRTPWAQWPRLPIYLKAMTLR
LEKYSSNPARDAAREADIQELEQMWQEKNDGLVKQGLPVSDDLTAFKWMIEELRVSLFAQ
ELKTPYPVSVKRLLKMWEDLN
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatatgaaaaaccaagtacgcggatcaggcatggatgcacgatccaatccggcc
aatgtttcagacggcctgcaaaacagttcgggtcatatcggtaccaacacgcgttaccgc
ctgaccaaactcggcgaacaaatggcgcgcctgcccatcgacccgaaaatcgcgcgcatt
ttgttggcggcgaagaaacacgactgcatggcggaaatattggtgatcgcgtccgcactg
tcgattcaagacccgcgcgagcggccgctggaagcgcgcgatgccgccgccaaggcgcac
gagcgttttaccgacaagcagtccgatttccttgcctatctgaacatttgggacagcttc
cagcgcgagcgcgacaagggcttgtccaacaagcagttggtgcagtggtgccgtcaatat
ttcctgtcgcacctgcggatgcgcgagtggcgcgagctgcaccaccagcttgcccaaacc
gcgattgaaatgggtttgaccaccaaggaagccgctttcagacgacctcccgaaatcagg
cagctcacgtcgtctgaaaaccaaggcgaccaagacctatccgccaaactcaagcaaaaa
caactggataagaaacaacaccgcgcccaaatccgcgctgccaaagaagcgggctacgaa
caaatccaccgcgccctgctcaccggcctcatcgccaacgtcggcatgaaatcgcccgac
ggcaacgactacaccggcgcgcgcggcagccgcttccaccttttccccgcctccgccctg
ttcaaagccaaacccaaatgggtgatggcggcagaactcgttgaaacgacaagactttat
gctcgcgacgtggccgccatccagcccgaatggatcgagcaggaagcgccgcacctcgtc
cgctaccactatttcgagccgcactgggagcaaaaacgcggcgaagttgtcgccggcgaa
cgcgtgacgctttacggcctgaccgtattgccgcgccgccccgtgtcttacggcaaagtt
gcgcccgaagaagcgcgcgaaatctttatccgcagtgcgctggtggcgcaggaatgcgat
ttgaaagcggacttttttgtccacaacaaaaagctgattaaagaaattaccgaactcgaa
cacaaatcgcgcaagcaagacgtattggtcgacgacgaagccctgtttgcgttttatcac
gaacggctgcccgatttttatacggcggatgcggtttcagacggtctgcgtcctgcaaat
ccccaacaaaccgccccctcccccgtgggggagggtcggggagagggcaaaacagttgcc
tctcaaaccaacttctccgcaaccacagcaaaccctctccctaaccctctcccgcaggag
agggaacagagtgccgcagcttcaacgttttcagacgacctgcgtcctgcaaatctgcag
caaaccgccccctcccccgtgggggagggtcggggagagggcaaaacagttgcctctcaa
accaacttctccgcaaccacagcaaaccctctccctaaccctctcccacaggagggggaa
cagagtgccgcagcttcagcggtttcaaacgaccctcaaccccaaaagcagccagcaccc
caaaaagaccgtctgaaacccctccccctcgccgacatccgcaccttccaagcctggctc
aaaaccgccgaacgcgagaacccgcgcctgctgttcctcagccgcgacgatttgatgcaa
cacgccgccgcacacattaccgaagaacagttccccaaattctggcaaaccgcagacggc
aagttcaaactttcctaccgctttgagccacaccatccgctcgacggggtgaccatgacc
gtgccgctgaccgtcctcaaccgcctgcatgcgccgtcgctcgaatggctggtgcccggt
atgttgcgcgaaaaaatccagctgctgattaaagcactgccgaagcaaatccgccgcatt
tgcgtgcccgtacccgatttcatcaccaaattcctcgaaaacaatcccgaccgccaagcg
gccatcattccccagttggcgcactttatcgccaaaagcgccagcgatatgcggattctc
gagcaaatcgaccaagacgcatgggcggcgcaagacttgcccgaacactgctatctgaat
ctgcgcattatcgacgacggcggacaagagcttgccggcggccgcaaactgcacgaattg
caacaacagctcggcaaagccgccgccaccaccttccgcgacaacacccaagaattcgag
cgcgacaacgtaaccacatgggacatcggcatcctgcccgaatccatcaaattcgcccgc
ggcaaacaacagcttaccggctatctcggcctgcaaaaagaaaaagacggccgcatcgcc
ctgcgcctatttgacaccaccgaagccgccgaacaggcacaccgtcaaggtgtcatcgaa
ttaatgaagctgcaattaaaagagcaggtgaaagatttgaacaaaggcatccagggcttc
acccaagccgccatgctgctcaaacacatcaacgccgacaccctgcgcgacgacctcacc
caagccgtttgtgaccgcgcctttatcggcgaagacgagctgccgcgcaacgaaaaagcc
ttcaaagaacaaatcaaacgcgcccgcagccgcctgcccgccgtcaaagaagccctcagc
cgctacctgcaggaaaccgccgccgcctacgccgaactgaacggcaaactcggcaaacac
ccattgacccaccttctaagactacgcctgcaaaccctgctcgccgccggcttcgccacc
cgcaccccgtgggcacaatggccgcgcctccccatctacctcaaagccatgaccctgcgc
ctcgaaaaatacagcagcaaccccgcccgcgacgcagcccgcgaagccgatatacaggaa
ttggaacaaatgtggcaggaaaaaaacgacggtttggtgaaacaaggactacccgtttca
gacgacctcaccgcgtttaaatggatgatcgaagaattgagggtgtcgctgttcgcgcag
gaattgaagacgccttatccggtgtcggtgaagcggttgttgaagatgtgggaggatctt
aattaa
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