Neisseria meningitidis 8013 (serogroup C): NMV_0851
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Entry
NMV_0851 CDS
T01928
Symbol
rpoD
Name
(GenBank) RNA polymerase sigma factor RpoD (Sigma-70)
KO
K03086
RNA polymerase primary sigma factor
Organism
nmt
Neisseria meningitidis 8013 (serogroup C)
Pathway
nmt02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
nmt00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
NMV_0851 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmt03021
]
NMV_0851 (rpoD)
Transcription machinery [BR:
nmt03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NMV_0851 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r1_1
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
SPO22
GTP_EFTU
DUF5660
TMPIT
Motif
Other DBs
NCBI-ProteinID:
CAX49733
UniProt:
A0A9K2PRT7
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All DBs
Position
complement(838893..840821)
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AA seq
642 aa
AA seq
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MSRNQNHEEYQDDTRPLSIEEQRARLRQLIIMGKERGYITYSEINDALPDDMSDADQIDN
IVSMISGLGIQVTEHAPDAEDILLSDNAAVTDDDAVEEAEAALSSADSEFGRTTDPVRMY
MREMGQVDLLTREDEIIIAKKIENALKNMVQAISACPGSIAEILELIEKIRKDEIRVDEV
VEAIIDPNEVLLNELGLGHLETTAPEKPSNDNSDENEDDEESEEDADEISAANLAELKQK
VIGHFAQIEKDYKKMIGRLEKHHSRHKDYLAYRDAIANKLLEVRFATRQIDSLSSSLRGK
VENIRKLEREIRDICLDRVHMERDYFIQNFLPEITNLEWIEEEIAKGRVWSDALDRFRHA
ILEKQTELADMEKETRISIEELKEINKNMVSSEKETAAAKQEMIQANLRLVISIAKKYTN
RGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIPVHM
IETINKMNRISRQHLQETGEEPDSAKLAELMQMPEDKIRKIMKIAKEPISMETPIGDDDD
SHLGDFIEDANNVAPADAAMYTSLHEVTKEILESLTPREAKVLRMRFGIDMNTDHTLEEV
GRQFDVTRERIRQIEAKALRKLRHPTRSDRLRSFLDSEDSKL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgtccagaaaccaaaatcacgaagaatatcaagacgacacccgtccgttaagcattgaa
gagcaacgcgcgcgcctgcgtcagctcatcatcatgggtaaagaacgcggctacatcacc
tactccgaaatcaacgacgccctgccagacgatatgtctgatgccgaccaaatagacaat
atcgtcagcatgatttccggtttgggcatccaagttaccgaacacgcccccgatgcggaa
gacatattgttaagcgacaatgccgccgttaccgacgatgatgccgtcgaagaagccgag
gccgccctttccagtgcagattccgagttcggcagaaccaccgaccccgtccgtatgtat
atgcgcgaaatgggacaggtcgacctgctgacccgcgaagacgaaatcatcatcgccaaa
aaaatcgaaaacgccctgaaaaatatggttcaggccatctccgcctgcccgggatccatt
gcggaaatcttagaactcatcgaaaaaatccgcaaagacgaaatccgcgtcgacgaagtc
gtagaagccattatcgacccgaatgaagtattgctcaacgaattgggcttggggcacttg
gaaaccacagcgcccgagaaaccttccaacgacaattcggacgaaaacgaagacgacgaa
gaatcggaagaagatgcggatgaaatctcggcagccaatctcgccgaattgaaacaaaaa
gtcatcggccactttgcccaaatcgaaaaagactacaaaaaaatgatcggtcgtttggaa
aaacaccacagccggcacaaagactatctcgcctaccgcgacgcgattgccaacaaactg
ctggaagtccgtttcgccacccggcaaatcgacagcctcagcagcagcctgcgcggaaaa
gtagaaaacatccgcaaactcgaacgcgaaatccgcgacatctgcctcgaccgcgtccat
atggagcgcgactacttcatccaaaacttcctgcccgaaatcaccaatctggaatggatt
gaagaagaaatcgccaaaggcagggtttggagcgacgcgctcgaccgcttccgccacgcc
atcctcgaaaaacaaaccgagttggcagatatggaaaaagaaacccgcatttccatcgaa
gagttgaaagaaatcaacaaaaatatggtgtcgagcgaaaaagaaaccgcagccgccaaa
caggaaatgattcaggcaaacttgcgcctcgtcatttccattgccaaaaaatacaccaac
cgtggcttgcagttccttgatttgattcaggaaggtaacatcggcctgatgaaagcggtc
gacaagttcgaataccgccggggctacaaattctccacctacgcaacctggtggatccgc
caggcaatcacccgttcgattgccgatcaggcgcgtaccatccgcattccggtacatatg
attgaaaccatcaacaagatgaaccgcatctcgcgccaacaccttcaagaaaccggcgaa
gaacccgattccgccaaacttgccgaactgatgcagatgcccgaagacaaaatccgcaaa
atcatgaaaatcgccaaagagccgatttcgatggaaacccccatcggcgacgacgacgat
tcgcacttgggcgacttcatcgaagatgccaacaatgttgcgccggccgatgcggcaatg
tacaccagcctgcacgaagtaaccaaagaaatcctcgaaagcctgacaccgcgtgaggca
aaagtcctgcgtatgcgtttcggcatcgatatgaacaccgaccacacgctggaagaagtc
ggcagacagtttgacgtaacgcgcgaacgcatccgacaaatcgaggcaaaagcactccgc
aagctgcggcatccgacaagaagcgaccgtttgagaagtttcttggacagcgaagacagc
aagctgtaa
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