KEGG   Nitrosospira multiformis: Nmul_A0447
Entry
Nmul_A0447        CDS       T00302                                 
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
nmu  Nitrosospira multiformis
Pathway
nmu02024  Quorum sensing
nmu03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:nmu00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Nmul_A0447
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Nmul_A0447
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:nmu03019]
    Nmul_A0447
   03036 Chromosome and associated proteins [BR:nmu03036]
    Nmul_A0447
Messenger RNA biogenesis [BR:nmu03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Nmul_A0447
Chromosome and associated proteins [BR:nmu03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    Nmul_A0447
SSDB
Motif
Pfam: Hfq LSM Hfq_1
Other DBs
NCBI-ProteinID: ABB73755
UniProt: Q2YBW6 A0A1H5RS97
LinkDB
Position
complement(496699..496944)
AA seq 81 aa
MSAKGQLLQDPFLNTLRKEHIPVSIYLVNGIKLQGHIDSFDQYVVLLKNTVTQMVYKHAI
STVVPARAVNIPFEAPPISDA
NT seq 246 nt   +upstreamnt  +downstreamnt
atgagcgctaaagggcaattgttacaagacccgtttctgaataccttgcggaaggaacat
attccggtttcgatttatctggtaaacggaatcaaactgcaggggcacatcgattcattc
gatcagtatgtagtgctgttgaagaataccgtcacccagatggtctacaagcacgcaatt
tctacggtagtccccgcaagagccgtcaacattccatttgaggcgccccctatatctgat
gcttga

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