Nitrosospira multiformis: Nmul_A0903
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Entry
Nmul_A0903 CDS
T00302
Name
(GenBank) Protein of unknown function UPF0027
KO
K14415
tRNA-splicing ligase RtcB (3'-phosphate/5'-hydroxy nucleic acid ligase) [EC:
6.5.1.8
]
Organism
nmu
Nitrosospira multiformis
Brite
KEGG Orthology (KO) [BR:
nmu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
nmu03016
]
Nmul_A0903
Enzymes [BR:
nmu01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.8 3'-phosphate/5'-hydroxy nucleic acid ligase
Nmul_A0903
Transfer RNA biogenesis [BR:
nmu03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
Nmul_A0903
Prokaryotic type
tRNA splicing ligases
Nmul_A0903
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcB
Motif
Other DBs
NCBI-ProteinID:
ABB74206
UniProt:
Q2YAL5
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All DBs
Position
1027803..1029230
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AA seq
475 aa
AA seq
DB search
MNLERLRQLQPCLWTLPRAPGEERAQVLLYGSAPLLVSMDDKVLEQIANVASLPGLVGAA
MTMPDAHWGYGFPIGGVAAFDAEQGGVISAGGVGFDISCGIRCLRSNLNLEDAVEHFPQL
GKALFRAIPAGVGEEGEIKLNPEQLDQVMHGGAHWAVQQGYGTPADLDYVEEQGRVAGAI
PENVSELAKKRQRGEMGTLGSGNHYLEVQVVDRIFDPGVALALGLHEGQILISIHCGSRG
LGHQIGTDYLVLLAKAASRSGIHLPDRELACAPVKSPEGQQYIGAMNAAINCALANRQIL
THLTRSVFTEIYPQAELETLFDVSHNTCKAETHQIDGESRLLYVHRKGATRAFGPGHPML
PERYRQVGQPVVIGGSMGTGSYILVGDSENPAFASSSHGAGRAMSRHQALARWKGRALVD
ELAQQGILIHTRSMRGVAEEAPGAYKDVDLVAEATEEAGLARRVAFLRPKVCVKG
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaatctggagcgcctacgtcaactgcaaccctgcctgtggacattgccgcgcgcaccg
ggcgaagaacgcgcgcaggtcctcctgtatggcagcgcgcccttgctcgtcagcatggac
gacaaggtactcgagcagatcgccaacgttgcttccctgccggggctggttggagcggca
atgaccatgccggatgcgcattggggatatggttttcccatagggggtgttgctgctttc
gatgctgagcaggggggggtgatttccgcaggcggggtcggcttcgatatttcgtgcggc
atacgctgtctgcgcagcaatctgaatctggaggatgcggtagagcattttccccagctc
ggaaaagccttgttccgcgctatccctgctggagtgggcgaggagggcgagatcaagctg
aacccggagcagctcgaccaggtgatgcacggcggtgcacactgggcggtacagcaaggc
tacggcactccagcagatctggattatgttgaagaacaggggcgggtagcaggagcgatc
ccggaaaacgtatccgaacttgccaaaaagcgccagcgcggcgagatgggcacgctcggc
tcaggcaatcattacctggaagtacaggtggtggaccgcatcttcgatcctggcgtcgcg
ctggcgcttggcctgcatgaaggacaaatcctgatttcgatacattgcggttcgcgtggg
ctggggcaccagatcggtaccgattatctggtgctattggcaaaagcagccagccgctcg
ggcattcatttacccgatcgtgaactcgcttgcgcgcctgtcaaatcccccgaaggccag
caatatatcggcgcgatgaatgctgcgatcaattgcgcgcttgccaaccggcaaatcctg
acgcatcttacgcgctccgtatttacggaaatttatccccaggccgagcttgaaaccttg
tttgatgtttcgcacaatacctgcaaggccgaaacccatcagatcgacggtgaatcgagg
ttgctgtatgtgcaccgcaagggcgctacacgcgcattcggcccgggccaccccatgctg
ccggaacgctaccgccaggtaggacaacccgtcgttatcggtggaagcatgggaacaggc
tcctacattctcgttggtgacagcgaaaatcccgccttcgcttcttcaagccacggtgca
ggccgggccatgagccggcaccaggcactcgcgcgatggaaaggacgtgcgctggtggac
gagttggcgcaacaaggtattctgatccatacccgctccatgcgaggtgtggcggaagaa
gccccgggcgcctataaggatgtcgatctggtggcggaggccacggaagaagccgggctc
gcccggcgcgtcgcgtttctccgacccaaagtctgcgttaagggttaa
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