Nitrosospira multiformis: Nmul_A2657
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Entry
Nmul_A2657 CDS
T00302
Name
(GenBank) DEAD/DEAH box helicase-like protein
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
nmu
Nitrosospira multiformis
Pathway
nmu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Nmul_A2657
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmu03019
]
Nmul_A2657
Enzymes [BR:
nmu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
Nmul_A2657
Messenger RNA biogenesis [BR:
nmu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Nmul_A2657
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Utp25_C
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
ABB75944
UniProt:
Q2Y5M7
LinkDB
All DBs
Position
complement(3048695..3050227)
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AA seq
510 aa
AA seq
DB search
MSFTELNLTPEILRAIADQGYTDPTPIQTQAIPHILEGRDIMGAAQTGTGKTASFTLPML
NLLQSGANTSASPARHPIRTLILVPTRELAIQVHESVKTYGKYLPLRYAAVYGGVDMEPQ
TRELRAGVEILVATPGRLLDHVQQKAINLSKVEILILDEADRMLDMGFLPDIKRILALLP
SQRQSLMFSATFSDEIKKLAGKLLREPVLVEVARRNTITELITHVVHPVVRERKRELLAH
LIKSQDLQQVLVFARTKHGASRLAHQLERDHISATAIHGDKTQTQRTEALAKFKQGVVRV
LVATDVAARGLDIEELPHVVNFELPTNPEDYVHRIGRTGRAGTKGDAVSLVCEDEAELLK
GIEKLLKFKLESKVVPGFEPETPVAQGEAAISHGRIDQKSAGSQPRGSQPRKLEQANSVM
SLNGTKGKTARSSKEHAGSRRTGKLPEDPLFTQPYTPGTFSGEPSDRTSAKSETPLPEKR
FDYFAHKQQKKPIPALFMPPRGQSKQGQEG
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtttaccgaacttaatttaacgcccgagattctgcgcgccatagcagatcaaggc
tataccgacccaactccgattcagacccaggcaattccccatatcctcgaaggcagggat
atcatgggcgcagcacagaccggtaccggcaagactgcgagttttacattgccgatgttg
aatctcctgcaatccggcgccaacaccagcgcctctcccgcccggcaccccatccgtacg
ctgattctcgttcccacgcgcgaactcgctatccaggtgcacgagagcgtaaaaacgtat
ggcaagtatcttccactgagatacgctgcagtttacggcggggtggatatggaaccgcaa
actcgagagttgcgggcgggggtagaaattctggtggctacgccgggacggctcctggat
cacgttcagcagaaggcgatcaacttatccaaggtagagattctcatactggatgaggca
gaccggatgctcgacatgggttttttgccggatatcaagcgcattcttgcattgctgcca
tcccagcgccagagcctgatgttttcggccacattttccgatgaaatcaagaaacttgcg
gggaagcttctgagagagccggtactggtcgaagtcgctaggcgcaacaccatcactgaa
ttgataactcatgttgtacatcctgtggttcgcgagcgcaagcgtgaattgttggcgcac
ctcatcaaatcgcaagacctgcaacaggttctggtatttgcccggaccaagcatggagcg
agccgcctggctcaccagctggaacgggaccatatcagtgcaacggcgattcatggggac
aaaacccagacgcagcgtaccgaagcgctggcaaaattcaaacagggcgtggtccgcgtc
ctggtggcgaccgacgtggctgcccggggattggacatcgaggaattgccgcacgtggtc
aatttcgagttaccgacaaatcccgaggattacgtacatcgcattggccgcacgggccgg
gctggaaccaagggcgatgccgtatcactcgtatgcgaggatgaggcggaattactcaaa
ggcatcgagaaattgctcaaattcaagctggaatcgaaagtcgttccaggtttcgagccg
gaaaccccggttgctcaaggggaagctgcgatctcgcacggaagaatcgatcagaaatct
gcggggtcgcagcctcgcggatcgcagccgcggaaactggagcaggcaaattcggttatg
tcgcttaacgggaccaagggtaaaactgccaggagttccaaggagcatgcaggctcccgc
agaaccggcaagttgccggaggacccgctctttacccagccctatacgccgggcacgttt
tcaggagagccttcggacagaaccagtgccaagtccgaaacacccctgccggaaaaacgg
ttcgactattttgcccataagcagcaaaaaaaacccattcccgcgttattcatgccgcca
cgcggtcaaagcaagcaggggcaggaagggtga
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