Neisseria musculi: H7A79_1266
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Entry
H7A79_1266 CDS
T07094
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
nmus
Neisseria musculi
Pathway
nmus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
H7A79_1266 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmus03019
]
H7A79_1266 (rnr)
03016 Transfer RNA biogenesis [BR:
nmus03016
]
H7A79_1266 (rnr)
Enzymes [BR:
nmus01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
H7A79_1266 (rnr)
Messenger RNA biogenesis [BR:
nmus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
H7A79_1266 (rnr)
Transfer RNA biogenesis [BR:
nmus03016
]
Prokaryotic type
tRNA degradation factors
H7A79_1266 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
RNase_II_C_S1
OB_Dis3
Motif
Other DBs
NCBI-ProteinID:
QNT59666
UniProt:
A0A7H1MDF1
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All DBs
Position
1283122..1285506
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AA seq
794 aa
AA seq
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MKKNTKLLSLREQDPFLARERQRYGQPLPSREWVIELLEREGVPLKMAALAEKLSVSGEE
YDFFERRIKAMARDGQVLINRRGAVCAADKLALVKCRVEAHKDGFGFAVPLTPDKKGDFV
LYERKMRGLMHGDIVTVRPAGTDRRGRREGQVLDIVERAQKQVVGRFYVDRGIAILEPED
RRLTQSIVLEPEGLAEMKPESGQVVVAEIESYPDGHRPAVAKLIEVLGDYADSGMEIEIA
VRKHQLPHIFSKACQQAAAEIPNRVRPQDTEGRVDLRSLPLVTIDGETARDFDDAVYAEK
QGRNFRLVVAVADVGHYVRPDDAIDKDALERATSVYFPRRVIPMLPENLSNGICSLNPGV
ERLCMVCDMVVTYAGNIKEYRFYPAVMKSHARLTYNQVWNWIEQGGDYPHKAQIDTLYKL
FKILQKKRHQRGAVEFESIETQMIFNDNGKIKRIVPVVRNDAHKLIEECMLAANVCAAEF
LLKNKHPSLFRNHLGPTPEKLTALREQLGLLGLHLGGGDNPAPKDYAKLAEQFKNRPDAE
LLQVMMLRSMQQAVYEPDNHGHFGLAYEAYTHFTSPIRRYPDLTVHRAIKAVLKQEKYKP
ESWQALGVHTSFCERRADDAGRDVENWLKTYYMRDKVGEVFEGRISGMANFGIFVTLEGV
HIEGMVHISDLGEDYFNFRPEIMAMEGERSGVRFNMGSRVTVKVARADLDTSKIDLALIS
GGEVPKKRGRKTAVQTASDKKTTKSRSKAAPVNKSETQPKSEKKAQTAVKNTRRKKAAAT
KGSKVTAKRSKNKA
NT seq
2385 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaaaataccaagttactcagtttgcgtgagcaagacccgtttttagcgcgcgaa
cgccaacgttatggacaaccgctgcccagccgtgagtgggttatcgaattgttggaaagg
gaaggcgttccgctgaaaatggctgcattggcagaaaagctgtcggttagcggcgaagaa
tatgattttttcgagcgccgtatcaaggcaatggcgcgagacggccaggtgctgattaac
cgtcgtggggcggtgtgtgcggccgacaaactggcgctggtgaaatgccgtgttgaagcg
cacaaagacggattcggcttcgccgtgccgctgactcccgataaaaaaggtgattttgtg
ctttatgaacggaagatgcgcgggttgatgcacggggatatcgttactgtacgccctgcc
ggcacggaccgcagagggcggcgggaagggcaggtgctggatattgttgagcgtgcccaa
aagcaggtggtgggtcgtttttatgtggatcgaggcatcgctatcttagagccggaagac
cgccgtttaacccaaagcatcgtgcttgagcctgagggtttggctgaaatgaagcccgaa
tcagggcaggtggtggtggccgaaatcgaaagctatcctgacggccaccgcccggctgtc
gccaaattaatcgaggtgttgggagattatgccgacagcggtatggaaatcgaaatcgct
gtgcgcaaacaccaactgccgcatattttcagcaaggcctgccaacaggcggctgctgaa
attcccaaccgcgtccgcccgcaggataccgaaggccgcgttgatttgcgcagcctgccg
ctggtaacgatagacggtgaaaccgcacgcgattttgatgacgcggtatatgccgaaaaa
cagggccgaaatttccgcttggtggtggcggttgccgatgtgggtcattatgtgcgcccc
gatgatgccatcgacaaagatgcgcttgagcgcgctaccagcgtatattttccgcgccgc
gtgattcccatgctgcctgaaaacctctccaacggcatttgttcgctcaaccccggtgtg
gagcgtttgtgtatggtgtgcgatatggtggtaacgtatgccggcaatatcaaagaatac
cggttttaccccgctgtgatgaaatcacacgcccgcctcacctataaccaggtgtggaat
tggatagaacagggcggcgattatccccacaaagcgcaaatcgacactttatacaagctg
tttaagattttgcagaaaaaacgccaccagcgcggagcagtcgaatttgagagtatcgaa
acacagatgattttcaacgataacggcaaaatcaaacgcattgtgccggttgtccgcaac
gatgcccacaaactgattgaagaatgtatgctggcggccaatgtgtgtgcggcagagttt
ttattgaaaaacaaacacccttcgctgtttcgcaaccatttgggccccacaccagaaaaa
ctcaccgccctgcgcgaacaacttggcctgctcggcctgcatttgggcggcggcgacaac
cctgcccccaaagactatgccaaactggccgaacaattcaaaaaccgccccgatgccgaa
ctgctgcaagtgatgatgttgcgctcgatgcagcaggccgtttatgagccggacaaccac
ggccacttcggcttggcatacgaagcttacacccatttcacctcgcccatccgccgttat
cccgatttaaccgtccaccgtgccatcaaggccgtgttgaagcaggaaaaatataagccc
gaatcatggcaggcgttgggcgtgcacacatcgttttgcgagcggcgcgccgatgatgca
ggccgcgatgtggaaaactggctgaaaacctactatatgcgcgacaaagtgggcgaagtg
tttgaaggccgcatttccggcatggccaatttcggtatttttgttacgcttgaaggcgtc
catatcgaaggcatggtgcacatcagcgatttgggcgaagactatttcaatttccgcccc
gaaatcatggctatggagggcgaacgcagcggagtgcgcttcaacatgggcagccgcgta
accgttaaggtggcgcgtgccgatttggataccagcaaaatcgatcttgcgctgatcagc
ggcggcgaagtgccgaaaaagcgcggcagaaaaactgccgttcagacggcctccgacaag
aaaaccacaaaaagccgaagcaaagctgcacccgttaataagtctgaaactcagcctaaa
tcagaaaaaaaggcacaaaccgccgtcaaaaacacccgtagaaaaaaggctgccgccaca
aaaggcagcaaagttacagccaaacgcagcaaaaataaggcttag
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