Neisseria musculi: H7A79_1883
Help
Entry
H7A79_1883 CDS
T07094
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase beta' subunit
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
nmus
Neisseria musculi
Pathway
nmus03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
nmus00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
H7A79_1883 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmus03021
]
H7A79_1883 (rpoC)
03400 DNA repair and recombination proteins [BR:
nmus03400
]
H7A79_1883 (rpoC)
Enzymes [BR:
nmus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
H7A79_1883 (rpoC)
Transcription machinery [BR:
nmus03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
H7A79_1883 (rpoC)
DNA repair and recombination proteins [BR:
nmus03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
H7A79_1883 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Biotin_lipoyl_2
Apocytochr_F_C
Peptidase_M23
Motif
Other DBs
NCBI-ProteinID:
QNT58865
UniProt:
A0A7H1MB50
LinkDB
All DBs
Position
complement(1942938..1947113)
Genome browser
AA seq
1391 aa
AA seq
DB search
MNLMNLFNPLQSAGIEEEFDAIKIGIASPETIRSWSYGEVKKPETINYRTFKPERDGLFC
AKIFGPVKDYECLCGKYKRLKFKGVTCEKCGVEVTLSKVRRERMGHIELAAPVAHIWFLK
SLPSRLGMVLDMTLRDIERVLYFEAYVVTEPGMTPLQRGQLLTEDDYYAKLEEYGDDFDA
KMGAEGIRELLRMLNIASEVEILRQELESTGSDTKIKKIAKRLKVLEAFQRSGMKLEWMI
MDVLPVLPPDLRPLVPLDGGRFATSDLNDLYRRVINRNNRLKRLLELHAPDIIVRNEKRM
LQEAVDSLLDNGRRGKAMTGANKRPLKSLADMIKGKGGRFRQNLLGKRVDYSGRSVITVG
PYLRLHQCGLPKKMALELFKPFIFHKLEKQGQASTVKAAKKLVEQEVPEVWDILEEVIRE
HPIMLNRAPTLHRLGIQAFEPILIEGKAIQLHPLVCAAFNADFDGDQMAVHVPLSLEAQM
EARTLMLASNNVLSPANGEPIIVPSQDIVLGLYYMTRDRINGKGEGSLFADVREVHRAYH
TNQVELGTKITVRLREWERNGQGGQEPVLKRYETTVGRALLSEILPKGLPFEYINKTLKK
KEISKLINASFRLCGLRDTVIFADHLMYTGFAYAAKGGISICVDDMEIPKEKAALLAEAQ
GEVKEIENQYRQGLVTNGERYNKVVDIWGRAGDKIAKAMMDNLSKQKVIDREGNEVDQES
FNSIYMMADSGARGSAAQIKQLSGMRGLMAKPDGSIIETPITSNFREGLTVLQYFIATHG
ARKGLADTALKTANSGYLTRRLVDVTQDLVVVEDDCGTSDGFVMKAVVQGGDVIEPLRDR
ILGRVTAADVVDSSGATLVEAGTLLNEQLVDLIDQSGIDEVKVRTPITCKTRYGLCAHCY
GRDLARGKLVNTGEAVGVIAAQSIGEPGTQLTMRTFHIGGAASRAAAASQVEAKSNGTAR
FSSQMRYVANNKGELVVIGRSCEVVIHDEIGRERERHKVPYGAILLVQDGASVKAGQTLA
TWDPHTRPMITEHAGLVKFENVEEGVTVAKQTDDVTGLSTLVVIDGKRRSASASKLLRPT
VKLLNENGEEVCIPGTSTAVSMAFPVGAVITVREGQEIGKGDVLARIPQASSKTRDITGG
LPRVAELFEARVPKDAGMLAEVTGTVSFGKETKGKQRLIITDVDGVAYETLISKEKQILV
HDGQVVNRGETIVDGAVDPHDILRLQGIEALARYIVQEVQEVYRLQGVKISDKHIEVIIR
QMLRRVNIADGGETGFITGEQVERSDVTLANEKAAAEGKELARYDNVLLGITKASLSTDS
FISAASFQETTRVLTEAAIMGKQDELRGLKENVIVGRLIPAGTGLTYHRTRRQVWQAHHE
AEVAEQVKEAE
NT seq
4176 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaatgaacctgttcaatccgttgcaatctgccggcatagaagaagaatttgat
gccatcaaaatcggtattgcctcacccgaaaccatccgctcgtggtcttacggcgaagtg
aaaaaacccgaaaccatcaactaccgtaccttcaagcccgagcgcgatggtttgttctgc
gccaaaatcttcggcccggtaaaagattacgaatgcttgtgcggcaaatacaaacgcctg
aaattcaaaggcgtaacctgcgaaaaatgcggcgtggaagttaccctttccaaagtgcgc
cgcgaacgcatgggccacatcgaactggctgcgcccgttgcgcacatctggtttttgaaa
tcgctgccctcgcgtttgggcatggtgttggacatgaccctgcgcgatatcgagcgcgtg
ctgtattttgaagcctatgtggtaaccgaacccggcatgaccccgctgcaacgcggtcag
ctgctgaccgaagacgactactatgccaagctcgaagaatacggcgatgatttcgatgcc
aaaatgggtgccgaaggtatccgcgagctgctgcgtatgctcaatattgcttcagaagta
gaaattctgcgccaagagttggaatctaccggctccgacaccaaaatcaaaaaaattgcc
aaacgcctgaaagtgctggaagctttccagcgcagcggcatgaagctcgaatggatgatt
atggacgtgctgccggtgttgccgccggatttgcgcccgctggtgccgcttgacggcggg
cgcttcgccacttccgatctgaatgatttataccgccgcgtcatcaaccgcaacaaccgc
ctgaaacgcctgctggagttgcacgctcccgacattatcgtgcgcaacgaaaaacgtatg
ctgcaagaagctgtggattcgttgctcgacaacggccgccgcggcaaggccatgaccggc
gccaacaagcgcccgcttaaatcgctggccgacatgattaaaggcaagggcggccgtttc
cgtcaaaacctgctgggtaaacgggttgattattcaggccgttccgtgattacagtaggc
ccttatctgcgcctgcaccaatgcggtctgcctaaaaaaatggcattggagctgtttaaa
ccgtttattttccacaagctggaaaagcagggtcaggcatcaaccgtgaaagccgccaaa
aaactggtggaacaggaagtgcctgaagtttgggatatcttggaagaggttatccgagag
cacccgattatgctcaaccgcgcgccgacactgcaccgcttgggcattcaggcgtttgaa
ccgattctgatcgaaggcaaggccattcagctgcaccccttggtatgtgccgcgtttaac
gccgacttcgacggcgaccaaatggccgttcacgttccattgagtcttgaggcgcaaatg
gaagcgcgcacattgatgctggcttccaacaatgtgttgtcgcccgccaacggagagccg
attattgtgccttcgcaagacatcgtattgggcctgtattatatgacccgcgaccgcatc
aacggcaagggcgaaggcagcctgtttgccgatgtgagggaggtgcaccgcgcctaccac
accaatcaagtggaactgggcaccaaaatcaccgtgcgtctgcgcgagtgggagcgcaat
gggcaaggcgggcaggagccggtgttgaaacgctacgaaactactgtcggccgtgcgttg
ctgagtgaaatcctgcccaaagggctgccgtttgaatatattaataaaacgcttaaaaag
aaagagatttccaagctgattaacgcctcgttccgcctgtgcggcctgcgcgataccgtg
atttttgccgaccacctgatgtacaccggctttgcctatgcggccaaaggcggcatctcg
atttgcgtggacgacatggaaatcccgaaagaaaaagccgccctgttggccgaagcgcaa
ggcgaagtgaaggaaatcgaaaaccaataccgccaaggtttggttaccaacggcgagcgc
tacaacaaagtggtcgatatctgggggcgtgccggcgacaaaatcgccaaagccatgatg
gacaatctttccaaacaaaaagtgatcgaccgcgaaggcaacgaagtggatcaggagtcg
ttcaactccatctatatgatggccgactcgggtgcccgcggctcggcagcgcaaatcaaa
cagctttccggtatgcgcggcctgatggcgaagccggacggttcgattatcgaaacgccg
atcacttccaatttccgtgaaggtttgacggtattgcaatactttatcgccacccacggc
gcgcgtaaaggtttggccgacaccgccttgaaaaccgccaactccggttatctgacccgc
cgtttggtggacgtaacccaagatttggttgtagtggaagacgattgcggcacttcagac
ggctttgtgatgaaagccgtggtgcagggcggtgatgttatcgagccgctgcgcgaccgt
attctcggccgggtaaccgctgccgatgtggtggactcttccggcgcaacgctggtggaa
gccggcacactgctgaacgagcagttagtcgatttaatcgaccagtccggcatcgatgaa
gtgaaagtacgcaccccgattacctgtaaaacccgctacggcctgtgcgcccactgctac
gggcgcgatttggcgcgcggcaaactggtcaataccggcgaagctgtcggcgtgattgcc
gcccaatccatcggcgagccgggtacccagctgaccatgcgcaccttccacatcggcggt
gccgcatcgcgtgccgccgccgccagtcaagtggaagccaaatccaacggcaccgcccgt
ttcagcagccagatgcgttatgttgccaacaacaaaggcgagctggtggttatcggccgc
tcctgcgaagtggtgattcatgacgaaatcggccgtgagcgcgaacgccacaaagtgcca
tacggtgccattttgctggtgcaggacggtgcatcggtgaaagccggtcaaacgctggca
acctgggatccgcacacccgcccgatgattaccgaacacgccggtttggtgaaattcgag
aatgtggaagagggcgtaaccgttgccaaacaaaccgatgatgtaaccggtttgtccaca
ctggtggtgattgacggcaaacgccgttcggcctccgcatccaaactgctgcgccccacc
gtgaaactgctcaacgaaaacggcgaagaagtgtgcattcccggaaccagcaccgctgtt
tccatggctttcccagtcggtgccgtgattaccgtgcgcgaagggcaggaaatcggcaag
ggcgatgtgctggcgcgcattccgcaggcttcttccaaaacccgcgacatcaccggcggt
ctgccgcgtgtggccgagctgtttgaagcccgcgtacccaaagatgccggcatgctggcc
gaagtaaccggcaccgtgtcgtttggcaaagaaaccaaaggcaaacagcgcctgattatc
accgatgttgacggtgtggcttacgaaactctgatttccaaagagaaacagattctggtg
cacgatgggcaagtggtaaaccgcggcgaaaccatcgtggacggcgcagtcgatccgcac
gacattctgcgcctgcaaggcattgaagcattggcgcgctacatcgtgcaggaggttcag
gaagtttaccgtctgcagggcgtgaagatttccgacaaacacatcgaggtgattatccgc
cagatgctgcgccgcgtgaatatcgcagacggcggtgaaacaggcttcatcaccggcgag
caggtagagcgcagcgatgttaccctggccaacgaaaaagcggcagccgagggcaaagag
cttgcacgctatgataacgtgttgttgggcattaccaaagcctcgctttcaaccgacagc
ttcatttcggccgcatcgttccaagaaaccacccgtgtgctcaccgaagcagccattatg
ggcaagcaggacgaactgcgcggtctgaaagaaaacgtgattgtcggccgtctgattcct
gctggcacggggttgacctaccaccgcacccgccgccaggtatggcaggcgcatcacgaa
gccgaagtggccgagcaggtgaaagaagccgaataa
DBGET
integrated database retrieval system
