Nitrospira moscoviensis: NITMOv2_0819
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Entry
NITMOv2_0819 CDS
T04041
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
nmv
Nitrospira moscoviensis
Pathway
nmv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NITMOv2_0819 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmv03021
]
NITMOv2_0819 (rho)
03019 Messenger RNA biogenesis [BR:
nmv03019
]
NITMOv2_0819 (rho)
Transcription machinery [BR:
nmv03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
NITMOv2_0819 (rho)
Messenger RNA biogenesis [BR:
nmv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NITMOv2_0819 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
AAA_25
OB_RNB
AAA_22
ATPase_2
DUF3086
S1CSD-TOTE-2
ResIII
AAA
AAA_16
Glu_syn_central
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
ALA57254
UniProt:
A0A0K2G8R5
LinkDB
All DBs
Position
773893..775164
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AA seq
423 aa
AA seq
DB search
MSVAKGEVMHLAELKQKSIADLNDVARDLKIEGAANLRKQELIFAILQAQTEKNGVVFGE
GVLETLPDGFGFLRAPDSNYLPGPDDIYISPSQIRRFNLRTGDIVSGQIRPPKESERYFA
LLKVEKVNYEDPEVARDKILFDNLTPLYPEERLNLEFDREEYCTRVMDLTTPIGKGQRGL
IVAAPRTGKTMLLQAIARAILKNHKEVTLIVLLIDERPEEVTDWQRQVKAEVISSTFDEP
AQRHAQVAEMVLEKAKRLVEHKKDVVILLDSITRLARAYNTIAPPSGKVLSGGLDSNALQ
RPKRFFGAARNIENGGSLTIMATALVDTGSRMDDVIFEEFKGTGNMEVHLDRRLADKRIF
PAIDISQSGTRKEELLVDRDRLNKMWILRKVLSPLGTMEAMEFLMDKIQGTKTNQEFLQS
MNR
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtcagttgctaagggggaagtcatgcatcttgcggagctcaaacagaagtccattgcc
gacctcaacgatgtggcgcgcgatctcaagatcgaaggggcggccaatctgaggaagcag
gagctgatttttgcgatcctgcaagctcagaccgagaagaacggcgtagtattcggggag
ggcgtgctggaaaccctgccggacgggttcggctttctccgggctccggactccaattac
cttcccggcccggatgacatttatatctccccctcgcagatccgacgattcaatctccgc
accggcgacatcgtctccggccagatccggccgccgaaggaaagcgagcgctacttcgcg
ctgctgaaggtcgagaaggtcaactacgaggatccggaagtcgcgcgggacaagatcctc
ttcgacaacctcacgccgctctatccggaagaacggctcaatctggagttcgaccgcgag
gagtactgcacgcgggtgatggacctcacgacgcccatcgggaagggccagcgcggcttg
atcgtcgcggcgccccgcaccgggaagacgatgttgctgcaagccatcgcgcgcgcgatt
ttgaaaaaccacaaggaggtgactctgatcgtgctgctcatcgacgagcggcccgaagaa
gtcaccgactggcagcggcaggtcaaggccgaagtcatcagctcgaccttcgacgaaccg
gcccagcgtcatgcgcaggtggccgagatggttttggaaaaggccaagcggctggtcgag
cacaagaaagacgtggtcatcttgttggacagcatcacgcgtctcgcgcgagcgtacaat
acgatcgccccgcccagcggcaaggtcctgtcgggcggtctcgattccaacgcgctgcag
cggcccaaacggttcttcggcgcggcgcgcaatatcgaaaacggcggcagcctgaccatc
atggcgacggcgctcgtcgatacggggagccgcatggacgacgtgatcttcgaagagttc
aaagggaccggcaacatggaagtgcatttggatcggcggttggccgacaagcgcatcttc
ccggccatcgacatcagtcagtccggcacccgcaaggaagagctgctggtggatcgcgac
cgactcaacaagatgtggatcctccggaaggtgctcagcccgttgggaaccatggaagcc
atggagttcctcatggacaaaatccagggcaccaagacgaaccaggagttcttgcagtcc
atgaaccgataa
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