Nitrospira moscoviensis: NITMOv2_1402
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Entry
NITMOv2_1402 CDS
T04041
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
nmv
Nitrospira moscoviensis
Pathway
nmv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NITMOv2_1402 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmv03019
]
NITMOv2_1402 (rhlE)
Enzymes [BR:
nmv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
NITMOv2_1402 (rhlE)
Messenger RNA biogenesis [BR:
nmv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NITMOv2_1402 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
ALA57829
UniProt:
A0A0K2GAC2
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All DBs
Position
1313033..1314325
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AA seq
430 aa
AA seq
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MDTSVHLNFHSLGLSDALLRDLTSAGFSSPTPIQVQAIPPALAGRDVIGCAQTGTGKTAA
FVVPMIERLAALPKGQPQALILAPTRELAMQILTTIDKLGRSRRISATVIVGGADMQAQV
RGLRQKPDIIVATPGRLLDHMWNGTIHLTPIKMLVLDEADRMLDMGFAPQINQILDALPE
ERQTLLFSATLPADLTRLVQASVNNPVRVMVAPSATTADGVTQAVHHTTHDAKPELLLSL
LGQEQETVLVFTRTKHRADKLGRVLGRVGHKVAVLHGDRSLSQRRAALEGFKRGTFRVLV
ATDIAARGIDVANIGHVVNFDLPNCPEDYVHRIGRTARMKTTGRATSFVTAEDHQQLRDI
ERLLGQVVPLAPGSAKPAYDGRAGAAAAPRSPRHGHGRRDAFRDRRPVGHSHAPGTPPRQ
QTHSAVKTGN
NT seq
1293 nt
NT seq
+upstream
nt +downstream
nt
gtggatacgtctgttcacctcaattttcacagtctcggtctgtccgatgcccttttgcgg
gacctcaccagcgccgggttttcttcacccacgcccatccaggtgcaagcgattccgccg
gcccttgcgggccgcgatgtcatcgggtgcgcgcagaccggaacgggcaaaaccgcggcc
ttcgtcgtcccgatgatcgaacggctcgccgcgctgccgaaggggcaaccgcaggcgctg
attttggcgccgacgcgcgagctcgccatgcagattctgacgacgatcgacaagctcggc
cgcagccgccggatttccgccaccgtgatcgtgggcggcgccgacatgcaggcgcaagtg
cgggggcttcggcagaaaccggacatcatcgtcgcgacgccgggccgcctgctcgaccac
atgtggaacggcacgatccatctgacgcccatcaagatgctggtgttggacgaggccgac
cgcatgctcgatatgggcttcgcgccgcagatcaaccagattttggatgcgctgccggaa
gagcggcagacgctgctcttctccgcgaccctgccggccgacctcactcggctggttcag
gccagcgtgaacaaccccgtgcgcgtcatggtcgctccgtcggccaccaccgcggacggc
gtcacgcaggcggtgcatcacaccacgcacgacgccaagccggagctgctcctgtcgctc
ctgggacaggaacaggaaacggtgctggtcttcacacgcacgaaacatcgggccgacaag
cttgggcgggtcctcggacgggtaggccacaaggtcgccgtgttgcacggggaccggagt
ctctcgcaacgccgggcggcgttggaaggcttcaagcgcggaacgttccgcgtgctggtc
gccaccgacatcgccgcgcggggcatcgatgtggcgaacatcggccatgtcgtcaacttc
gatttgccgaactgtcccgaagactacgtccatcgcatcggacgcacggcgcgcatgaag
acgaccggacgcgccaccagctttgtcactgcggaagaccaccagcagctgcgcgacatc
gagcggttgttgggccaggtggtgccgctggcgcccggcagcgccaagccggcctacgac
ggccgcgcgggggcggcggcagctcctcgatcgccgcgccatggtcatggacgacgggac
gctttcagagaccgccggccggtgggtcacagccatgctccgggaacgccgccccgccag
cagacgcattcggcggttaaaaccggaaattga
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