Nitrospira moscoviensis: NITMOv2_2042
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Entry
NITMOv2_2042 CDS
T04041
Symbol
dnaE
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nmv
Nitrospira moscoviensis
Pathway
nmv03030
DNA replication
nmv03430
Mismatch repair
nmv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nmv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NITMOv2_2042 (dnaE)
03430 Mismatch repair
NITMOv2_2042 (dnaE)
03440 Homologous recombination
NITMOv2_2042 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmv03032
]
NITMOv2_2042 (dnaE)
03400 DNA repair and recombination proteins [BR:
nmv03400
]
NITMOv2_2042 (dnaE)
Enzymes [BR:
nmv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NITMOv2_2042 (dnaE)
DNA replication proteins [BR:
nmv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NITMOv2_2042 (dnaE)
DNA repair and recombination proteins [BR:
nmv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NITMOv2_2042 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DUF7645
Motif
Other DBs
NCBI-ProteinID:
ALA58459
UniProt:
A0A0K2GC83
LinkDB
All DBs
Position
complement(1904062..1907523)
Genome browser
AA seq
1153 aa
AA seq
DB search
MASSFVHLHLHTQFSLLDGANQIEPLVQQVKAYGQPAVAMTDHGNMFGAVEFYRKAKEAG
VKPIIGCEAYMALGSRLAKKDSGLAHNDYYHLILLARNLTGYQNLIKLVSKAYLEGFYYK
PRMDKEILKEHHDGLIALSGCLSGEIPYLIGQKDMAGAMAVAGEFQEIFGKDHFYLEVQA
NGLDHQRVANAGLMEIHKKLGIPLAGTNDCHYLNKEDSRPHELMLCLQTGKTLSDPNRMK
FDTDQLYVKSTEEIAPAFAEFPGAVSNTCRIADHCELELTLNKTHLPQYKVPEGYTRESY
VEHLAIAGLKERLKERPSKVPSAVYEQRLREELMVICSMGFAGYFLIVWDIIRFARLRGI
PVGPGRGSAAGSLVAYALRITDLDPLVYTLLFERFLNPERVSLPDIDMDFCMDRRGEVIN
YVVEKYGSDHVAQIITFGTLGAKAAIRDVGRVLEIPYAECDKVAKLVPNQLNITLQQALE
QEPKLRELVETDTKIAELMKVAQSLEGLARHASTHAAGVVISEGPLTDHVPLYKGANDEI
VTQYTMGDVEKIGLVKFDFLGLKTLTMIKRAVDLINAGDPDRPPLIIEEIPFDDAKTFQL
LSSGKTTGLFQLESSGMRDLLTGLKPDRFEDIIAIIALYRPGPMDLIPDFIKRKQGKVPI
TYETPELEPILKDTYGVIVYQEQVMAIANKVAGFSLGQADILRRAMGKKKPEEMEKLRVK
FLDGAKQNKIPEKKAEKLYELIQKFAGYGFNKSHAAAYAVVCYHTAYLKAHYPTEFMAAL
MTSDMGNTDKIVGYFTECRDLGIKVLGPDVNASQKNFAVADGAIRFGLAAIKNVGEGAVE
SVLAVRSESGPFTSFFDFCRRVDLHKVNKRMLEGLIKAGAFDSTGAKRAQLMAVLDQAVE
AGAAAQHERDCGQTSIFGDAMAGHETPAHAATPPLPAIPEWDQAQRLKYERELTGFYITA
HPLARYEATIQALSTATTAGLAELSDGKEVKICGIIATVKSMLTKKGDRMAYLTVEDLQG
TVEVIAFPDLFKSAGDLIAPERLVRITGTIDRGDKGTKLRGAKIEPLADVQTQSIKRVRI
CLTDRPEVREQLPKLLDIFKRHPGTSTISMTFRTDGALEADTAPLPHLAVSASEHFVADV
EEVLGKGSLSLLS
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
gtggcgtcatccttcgtccatctgcatctccacacgcagttcagcctgttggacggcgcg
aatcagatcgagccgctcgtccaacaagtgaaagcctacgggcagccggcggtggccatg
acggaccatggcaacatgttcggggcggtggagttctaccggaaggcgaaagaggcgggc
gtcaaaccgatcatcgggtgcgaagcctacatggcgctcggcagccgcctggcgaagaag
gacagcgggctcgcgcacaacgattactaccatctgatcctgctcgcccggaatctgacc
gggtatcaaaacctcatcaagctcgtcagtaaagcctaccttgaaggcttctactataag
cctcggatggacaaggagattctcaaggagcaccacgacgggttgatcgccctctccggc
tgcctgagcggcgagattccgtatctcatcggccaaaaagacatggccggcgcgatggcc
gtggcgggggagtttcaggagatcttcggaaaagatcatttctatctcgaagtccaggcc
aacgggctggaccaccagcgggtggcgaacgcggggttgatggagatccataagaaactc
ggcatcccgctcgccggcacgaacgactgccattatctgaacaaggaagatagccggccc
cacgaattgatgttgtgcctgcagaccggcaagaccctgagcgatcccaaccggatgaag
ttcgatacggatcagctctacgtgaaatcgacggaagaaatcgcgccggcgttcgccgaa
ttccccggcgccgtgagcaacacctgccgcatcgcggatcactgcgagctggagctgacg
ctcaacaagacccatcttccccaatacaaagtaccggagggctatacccgcgagtcgtac
gtcgaacatctcgcgatcgccggcttgaaggaacggctgaaggagcggccgagcaaggtg
ccgtccgccgtgtacgagcagcggctgcgggaagagctgatggtgatctgctcgatggga
ttcgcgggctacttcctcatcgtgtgggacatcatccgcttcgcccgcttgcgcggcatt
ccggtgggaccgggccgcggctccgccgccggaagcctcgtcgcctacgcgctccgcatc
accgacctcgatccgctcgtctacaccctgctcttcgagcgctttctgaatcccgagcgc
gtgtcgctgccggatatcgacatggacttctgcatggaccgccgcggcgaagtcatcaat
tacgtcgtcgagaaatacggctccgaccacgtggcgcagatcatcacgttcgggacgctc
ggcgcgaaggccgccatccgcgacgtgggccgcgtgctcgaaatcccctatgccgagtgc
gacaaggtcgccaagctggtccccaatcagttgaacatcacgctccagcaggcgctcgag
caggagccgaagctccgcgagctggtcgaaaccgacaccaagatcgccgagctgatgaag
gtggcgcagtcgctcgaaggcctggcccggcacgcctccacccatgcggccggcgtcgtg
atctcggaagggccgctgaccgatcacgtgccgctctacaagggggccaacgacgaaatc
gtcacgcaatacacgatgggcgacgtcgagaagatcggcctcgtgaagttcgactttttg
ggtttgaaaacgcttacgatgatcaagcgggccgtcgacctcatcaacgccggcgacccc
gaccgccccccgttgatcatcgaggaaattccattcgacgacgcgaagacgtttcagctc
ttgtcgtccggcaagacgaccgggctgttccagctcgaaagctccggcatgcgggatctg
ctcaccggcctgaaaccagaccggttcgaggacatcatcgccatcatcgcgctctatcgc
cccggtccgatggacctgatccccgacttcatcaagcggaagcagggcaaggtgccgatc
acctacgagacgcccgagctggagccgatcctgaaggacacctacggcgtgatcgtctat
caggaacaggtgatggcgatcgccaacaaggtggcgggcttttcgctcggccaagccgac
attctccgccgcgcgatgggcaagaaaaagccggaggagatggaaaagctccgcgtgaag
ttcttggacggcgcgaagcagaacaagattcccgagaagaaggccgagaagctctacgag
ctgatccaaaaattcgccggctacgggttcaacaagtcccacgccgcggcctacgcggtg
gtctgctaccacacggcctatctcaaggcccactaccccaccgagttcatggcggcgctc
atgacgagcgacatgggcaacaccgacaagatcgtcggctacttcaccgagtgccgcgac
ctcggcatcaaagtgctcgggcccgacgtcaatgccagccagaagaacttcgccgtcgcc
gacggcgcgatccgcttcggcctggccgccatcaagaacgtcggcgaaggcgcggtggaa
tccgtgttggccgtgcgcagcgagagcgggccgttcacctcgttcttcgacttctgccgg
cgggtggacctgcacaaagtgaacaagcgcatgctggaaggcctgatcaaagccggcgcg
ttcgactcgaccggcgcgaagcgggcgcagctcatggccgtgctcgatcaggccgtggag
gccggcgcggccgcccagcacgagcgcgattgcggccaaacgagcattttcggtgatgcg
atggccgggcatgagaccccggcgcacgccgcgacgccgccgctgccggccatccccgag
tgggaccaggcccaacggctgaagtacgagcgcgagctgacgggcttctacatcaccgcc
catccgctggcgcgctacgaggcgacgatccaggccctctcgacggcgacgacggcgggc
ctcgccgagctgtccgacggcaaagaggtgaagatctgcggcatcatcgccaccgtgaaa
tcgatgctgaccaagaaaggcgaccggatggcctatctgaccgtggaggacctgcaaggc
acggtcgaagtgatcgcctttccggacctcttcaaatccgccggcgacctgatcgcgccg
gagcgcctcgtgcgtatcaccggcaccatcgatcgcggcgacaaggggacgaagctgcgg
ggcgccaagatcgaaccgctggccgacgtgcagacccagtcgatcaagcgcgtccggatc
tgcttgaccgatcgtccggaggtccgggagcagttgcccaagctgctcgacatcttcaag
cgccacccgggcaccagcaccatttccatgacgttccggaccgacggcgcgctggaggcc
gacacggcgccgctgcctcacctggccgtcagcgccagcgagcatttcgtggcggatgtt
gaagaagtgctaggcaaaggctccctatctttgctatcttag
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integrated database retrieval system
