Nitrospira moscoviensis: NITMOv2_3439
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Entry
NITMOv2_3439 CDS
T04041
Symbol
holB
Name
(GenBank) DNA polymerase III, delta' subunit
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
nmv
Nitrospira moscoviensis
Pathway
nmv03030
DNA replication
nmv03430
Mismatch repair
nmv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nmv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NITMOv2_3439 (holB)
03430 Mismatch repair
NITMOv2_3439 (holB)
03440 Homologous recombination
NITMOv2_3439 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmv03032
]
NITMOv2_3439 (holB)
03400 DNA repair and recombination proteins [BR:
nmv03400
]
NITMOv2_3439 (holB)
Enzymes [BR:
nmv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NITMOv2_3439 (holB)
DNA replication proteins [BR:
nmv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NITMOv2_3439 (holB)
DNA repair and recombination proteins [BR:
nmv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NITMOv2_3439 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
AAA
Motif
Other DBs
NCBI-ProteinID:
ALA59831
UniProt:
A0A0K2GFV6
LinkDB
All DBs
Position
3246409..3247503
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AA seq
364 aa
AA seq
DB search
MTAAPPACRPIASTVPSRVQSAMPFRDITGHERPIGILQAALRNQRLAHAYLFHGDTGIG
KHLTATRLVQTLYCERPPASGDPDSCGSCRACQQVAARTHPDYTVIEPDPELATPQIKIE
QVRDIEQQFVYRPLMGERKVCLIDRADCMTIGAANALLKTLEEPPGHGLFILITGRPHAL
PITIRSRCQSLRFTAPARTQVEAALILTREIPPADARFLAVLADGRIGEALAMDLAEARA
RQEECLTLVDPATLTSTPALLSAAESLAKADRGAEILAWLARWIRDLVLVSVGGDQDQLL
HLDRLTALQQYAGRADVGMLLDLLRDIERTEQQATRHLNLHMALETSLLRLREALGLAPA
GAAA
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
ttgaccgctgcgccgccggcttgccgcccgattgcatccaccgtcccatcccgggtacag
tcggccatgccctttcgggatattaccgggcacgaacggccgatcggcattctgcaagcc
gccctacggaatcagcgcctggctcacgcgtacctgttccacggcgacacgggaatcggc
aaacacctgacggccacgcgtctcgtgcagacactctattgcgagcggcctcccgcctcc
ggagatccggacagctgcgggagctgccgcgcctgccagcaggtcgcggcgaggacgcat
ccggattataccgtcatcgagccggaccccgagcttgccacgccgcaaatcaagatcgag
caggtgcgcgacatcgagcagcagttcgtgtaccggccgctcatgggggagcgcaaggtc
tgcctgatcgatcgggcggattgtatgaccatcggcgccgcgaacgcgctgctgaagacg
ctggaggagccccccgggcacggccttttcatcctgatcaccggccggccgcacgccctg
ccgatcaccattcgatcgcgctgccagtcgctgcggttcaccgcgccggcacgcacacag
gtggaggccgcgctgattctcacgcgcgagattccgcccgccgatgcccgcttcctcgcc
gtgctcgccgacgggcgtatcggagaagccctggcgatggatctggcggaggcccgcgcg
cgacaggaggaatgcctcacgctggtggatccggcaactctgacgtcgactcccgccctg
ctttcggccgccgagagtctcgcgaaggccgatcgcggtgcggagatcctcgcttggctg
gcccgctggatccgtgacctcgtcctcgtgagcgtcggcggggatcaggatcagctgctt
cacctcgatcggctcaccgccctgcagcagtacgccggccgggccgacgtcggcatgctg
ctggacctcctgcgggatatcgagcgcaccgagcaacaggccacgcgccatctgaatctg
cacatggcgctggagacatcgctcctgcgcctgcgggaggcgctcggcctcgccccggct
ggcgcggccgcctag
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integrated database retrieval system
