Nitrospira moscoviensis: NITMOv2_4170
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Entry
NITMOv2_4170 CDS
T04041
Symbol
rny
Name
(GenBank) Ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
nmv
Nitrospira moscoviensis
Pathway
nmv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NITMOv2_4170 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmv03019
]
NITMOv2_4170 (rny)
Messenger RNA biogenesis [BR:
nmv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NITMOv2_4170 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
DUF1490
KH_KhpA-B
DivIVA
Ribosomal_L22
SCIMP
KH-I_KHDC4-BBP
KH_2
Motif
Other DBs
NCBI-ProteinID:
ALA60550
UniProt:
A0A0K2GHX4
LinkDB
All DBs
Position
complement(3941170..3942771)
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AA seq
533 aa
AA seq
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MPGHFEKGVTPISTSIVVYILCVLVGALVGVGLYEVVRRNLASAKRAELEEQAKQVVQQA
QREAENVLKEARLEAKDLVFQAKSELEKEQKAKLAELSTVEKRLMQREEGLDRKLAALEK
RESESQRRDQEVARREEGLLAKEAACAKAEREHREALERVAGMTADEAKKQLIVEMETQA
RLDAAGIAKRTIEEARENAEREAREIITTSIQRVVRDYVSESTISVVPIPNDAMKGRIIG
REGRNIRAIEAATGIDLIIDETPEAVIISGFDPLRREIAKVSLERLMHDGRIHPTRIEEI
VEKVKADIDKLMYEEAEKIIFELGLSDFNPELIKVLGRLKYRTSYGQNNLYHAREAAYIC
GIMASELGLDVRLARRGALLHDIGKAVSHEEEGPHAMLGAELAKKYGESPKIVNAIAAHH
EQVEPICPESVLVAAAEALSAARPGARREALESYVKRLEKLESLATGQKGVQKAYAIQAG
REIRVIVRQEDITDAESFQLSRDLAKKIEQELTYPGQIKVTVIRESRYVEYAK
NT seq
1602 nt
NT seq
+upstream
nt +downstream
nt
gtgcccggtcatttcgagaagggggtgactcccatttctacctcaatcgtagtctatatc
ctctgtgtgctggtgggagccctggttggtgtagggctctacgaagtggtccggcgcaat
ctggcgtcggccaagcgggccgagttggaagaacaggccaagcaggtggtgcagcaggcc
cagcgtgaggccgagaatgtgttgaaagaggcgcgcctggaggcgaaggatttggtcttc
caagccaagtccgaattggagaaggagcaaaaggcgaaactggccgagctctcgacggtg
gaaaagcgcctgatgcagcgcgaggagggcctggatcgaaaattggcggcgctcgagaaa
cgggaaagcgagtcgcagcgacgcgatcaggaagtggcccgccgcgaggaaggcctgctg
gcgaaagaagccgcttgcgccaaagccgagcgggaacatcgggaggcgttggaacgggtc
gccggcatgaccgccgacgaggcgaagaagcaactgatcgtggagatggaaacgcaggca
cggctcgatgcggcggggatcgcgaagcggacgatcgaagaggcgcgtgaaaacgccgaa
cgtgaagcgcgagagatcatcacgacgtccatccagcgggtcgtgcgggattacgtctcc
gaatcgacgatttcggtcgtgcccattccgaacgacgccatgaaaggccggattatcggg
cgggaaggccgtaacatccgcgcgatcgaggcggccaccggcatcgatctcatcatcgat
gagacgccggaagcggtcatcatttccggcttcgatccgctgcgccgtgaaatcgccaaa
gtctcgcttgagcggctgatgcatgacggacggatccatccgacgcgcatcgaagagatc
gtcgaaaaagtgaaggccgacatcgacaagctgatgtacgaagaagccgaaaaaatcatt
tttgagctgggcctgtccgatttcaatcccgagctcatcaaagtgctggggcggttgaag
tatcgcaccagctacgggcagaacaatttgtatcacgcccgggaagcggcctatatctgc
gggatcatggcgtccgagttggggctcgacgtgcgtctggccaggcgcggcgccttgttg
cacgacatcggcaaggcggtcagccacgaggaagagggaccgcacgccatgctcggcgca
gagctcgcgaagaagtacggcgagtcgccgaaaatcgtgaacgcgatcgccgcccatcac
gagcaggtcgagccgatttgcccggaaagcgtcctggtggcggcggcggaagcgttgtcg
gcggccaggccgggagcgagacgggaggccttggagtcgtatgtgaaacgactggaaaag
ctcgaatccctggcgacgggacaaaagggtgtacaaaaggcttatgccatccaggcgggg
cgggaaattcgcgtgatcgtcaggcaagaagacatcaccgacgcggagtcgttccagttg
tcccgcgatctggccaagaagatcgagcaggagctgacctacccgggccaaatcaaagtg
accgtcattcgcgagagccggtacgtggagtacgcgaaatga
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