Nitrospira moscoviensis: NITMOv2_4478
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Entry
NITMOv2_4478 CDS
T04041
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
nmv
Nitrospira moscoviensis
Pathway
nmv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NITMOv2_4478 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmv03019
]
NITMOv2_4478 (pnp)
03016 Transfer RNA biogenesis [BR:
nmv03016
]
NITMOv2_4478 (pnp)
Enzymes [BR:
nmv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NITMOv2_4478 (pnp)
Messenger RNA biogenesis [BR:
nmv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NITMOv2_4478 (pnp)
Transfer RNA biogenesis [BR:
nmv03016
]
Prokaryotic type
tRNA degradation factors
NITMOv2_4478 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
DUF5813
KH-I_KHDC4-BBP
S1_RRP5
SPATA25
DUF6549
Motif
Other DBs
NCBI-ProteinID:
ALA60852
UniProt:
A0A0K2GJQ2
LinkDB
All DBs
Position
complement(4218633..4220750)
Genome browser
AA seq
705 aa
AA seq
DB search
MVHVVELDVAGRTLRLETGRVAKQADGSIWASYGDTVVLATAVASQTAKPGVDFLPLTVD
YQEKTYAAGKIPGGYFKREGRPSEKEVLTSRLIDRPLRPLFPEGYYFETQVIASVLSADK
TGSSDVIGITAASAALAISNIPFNGPVAGVKIGRVNGQFIVNPDLDTMEKSELNLVVAGT
ADAVMMVEAGADELPEATMLEALELAHAEIKKIVAKISELAKKVGNKKREVAVESIDPAL
AAKVKELVAQPIRDAIMIPNKTARQERLDAILSDAVEKLKNPDEPSSERHIKIVFHGLEY
TEVRNMILEKGSRADGRGPADIRPITIEVGVLPRTHGSALFTRGETQSLAVVTLGTTEDE
QRIDALEGEYTRTFMLHYNFPPFSVGEARPLRSPGRREVGHGALAERALKPVIPGKESFP
YTLRIVSEILESNGSSSMATVCGGTLAMMDAGVPIKEPVAGIAMGLIKEGDAVMILSDIL
GLEDHLGDMDFKVCGTKNGVTALQMDIKIGGITTALMQQALEQARTGRLHILSHMAKALG
APRANLSPFAPRIFTLKVKQDKIRDVIGPGGKTIRGIIAECGVKINVEDTGIVTIASVDE
ASAQKAKDMIGRLTEEVEVGKTYLGTVRKIMDFGAFVEVLPGTDGLVHISQLAHHRVKAV
SDEVAEGDQILVKVLEIDKQGKIRLSRKETMPAPSGSGAKEPTAG
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atggtacatgttgttgaactcgatgtggcgggccggacgctccggctcgaaaccggccgc
gtggccaagcaagccgacggatcgatctgggcgtcgtacggcgatacggtcgtgctggcg
accgcggtcgcctcccagacggcgaaaccgggggtcgactttctccccttgaccgtcgac
taccaggaaaagacctacgccgccggcaagattcccggcggctacttcaagcgggaaggc
cggccgtccgagaaggaagtgctcaccagccggttgatcgaccgccccctccgtccgctc
ttccccgaaggctactacttcgaaacgcaggtcatcgcctcggtcctgtccgccgacaag
accggttcgtccgacgtgatcggcattacggccgcgtcggccgcgctggccatttccaat
atcccgttcaatggaccggtcgccggcgtgaagatcggccgtgtcaatggccagtttatc
gtgaatcccgatctggacacgatggagaagagtgagctgaaccttgtcgtggccgggacg
gccgacgccgtgatgatggtcgaggcgggcgcggacgaactgcccgaagcgacgatgctg
gaggcgctggaactcgcgcatgccgagatcaagaagatcgtcgcgaaaatttcggagctg
gcgaagaaagtcggcaacaagaagcgcgaggtggcggtcgaatcgatcgatcccgccctg
gcggccaaggtgaaggaactcgtggcgcagcccatcagggacgcgatcatgatcccgaac
aagacggcgcggcaggagcggctcgatgcgatcctgtccgatgccgttgagaaactcaag
aatccggacgaaccgagcagcgagcggcacatcaagatcgtcttccatggattggagtat
acggaagtccggaacatgatcctcgaaaaaggctcgcgcgcggacggccgcggtcccgcg
gatatccgtcccatcaccatcgaggtcggcgtcctgccgcgcacgcatgggtcggcgctc
ttcacgcgcggcgaaacccagagcctcgccgtggtgacgctgggcacgaccgaggatgag
cagcggatcgacgcgctggaaggcgagtacacgcgcaccttcatgctccattacaatttt
ccgccgttcagcgtgggcgaggcgcggccgctgcggtcgccgggccggcgcgaagtcggg
cacggggcgttggccgagcgggcgctgaagcccgtcattcccggcaaggagagtttcccc
tacacgctccgcatcgtctccgaaattctcgagtcgaacggctcgtcgtccatggcgacc
gtctgcggcggcacgctcgcgatgatggacgccggggtgcccatcaaagagccggtggcg
ggcatcgcgatgggcctgatcaaggaaggggacgccgtcatgatcctctccgacatcctc
ggcctcgaagaccatctgggagacatggacttcaaagtctgcgggaccaagaacggtgtg
acggcgcttcagatggacatcaagatcggggggatcacgacggcgttgatgcaacaagcg
ctggagcaggcccgcaccggccggctccacattctgagtcacatggcgaaggccctcggc
gcgcctcgcgccaatctgtcgccgttcgcgccgcggattttcacgctgaaggtcaaacag
gacaagatccgggacgtgatcggtccgggcggaaaaaccatccgcgggatcatcgcggag
tgcggcgtgaagatcaatgtcgaggacacgggcatcgtcacgatcgcgtccgtcgacgaa
gcctcggcgcaaaaagccaaggacatgatcggccggctgacggaagaggtcgaagtcggg
aagacctacctcgggacggtgcggaagatcatggacttcggcgccttcgtcgaagtgctg
ccggggacggacggcttggtccatatttcccagttggcccatcatcgggtgaaggcggtc
tccgatgaagtggcggaaggggatcaaatcctggtgaaggtgctcgaaatcgacaagcag
ggcaaaatccgcctcagccggaaagagacgatgccggctccctccgggagcggcgcgaag
gaacccacggccgggtaa
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