Nitrospira moscoviensis: NITMOv2_4580
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Entry
NITMOv2_4580 CDS
T04041
Symbol
holA
Name
(GenBank) putative DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
nmv
Nitrospira moscoviensis
Pathway
nmv03030
DNA replication
nmv03430
Mismatch repair
nmv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nmv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NITMOv2_4580 (holA)
03430 Mismatch repair
NITMOv2_4580 (holA)
03440 Homologous recombination
NITMOv2_4580 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmv03032
]
NITMOv2_4580 (holA)
03400 DNA repair and recombination proteins [BR:
nmv03400
]
NITMOv2_4580 (holA)
Enzymes [BR:
nmv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NITMOv2_4580 (holA)
DNA replication proteins [BR:
nmv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NITMOv2_4580 (holA)
DNA repair and recombination proteins [BR:
nmv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NITMOv2_4580 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
DNA_pol3_gamma3
DNA_pol3_delta2
Motif
Other DBs
NCBI-ProteinID:
ALA60953
UniProt:
A0A0K2GJ29
LinkDB
All DBs
Position
complement(4325431..4326543)
Genome browser
AA seq
370 aa
AA seq
DB search
MAASSLTALQLDQALKQQSPAPLYLITGEEDLLRDGALASLKTGILGDQGDFNFDQFYGD
EAHGADIVNCASEMPVFAERRLVVVKSAEKLSARESDALLPYLKDPVGTTTLVFVCPKLD
GRLKFSQALARAAVTVDCSPLREAQLGPWITREAARLGVRLQDEAVQVLKEIGGGSLYGL
RRELEKLASYVTAGRLATADDVQMLRGTEPGASVFDLTLAIAGGDRARTLSILARNLDAG
EAPLRILGSLAWQYRRLWKVKDQFEAGGREGEAARTLRMDPTRVREFLSRFSHAHLQAAL
PLFLETDGLLKGGSQSHPRIVMERLLLRLCDAATQAPPGPSGRRPNVGGRGQTRSLPNVR
TITSAGRTGR
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggcggcttcctcgctcaccgctcttcaactggaccaggcgctgaaacaacaatcgcct
gcgccgctgtacttgatcacgggcgaggaggacctgttgcgggatggggccctggcgtcg
ctcaaaaccggaattctgggggaccagggggacttcaacttcgatcagttctacggcgat
gaggcccatggcgccgatattgtgaattgcgcgtcggagatgccggtgtttgccgagcgc
cggttggtcgtcgtaaagtccgccgagaaactgtcggcgcgcgaaagcgacgcgctgctg
ccgtacctgaaagacccggtggggacgaccacgttggtgttcgtctgccccaagctggac
ggtcgtctcaagttttcccaggcgttggcccgcgccgccgtgactgtggattgttctccg
ctgcgcgaggcgcagttgggtccgtggatcacacgggaagccgcccgtctgggagttcgc
ttgcaggatgaggccgtgcaggtgctcaaggagatcggcggcggatcgctctacggcctg
cggcgagaattggagaaactcgcgtcctatgtgacggcaggccggctggcgaccgccgac
gacgtgcagatgcttcgcgggacggagccgggcgcgtcggtgttcgacctcacgctcgcc
atcgccggcggggatcgcgccaggaccctgtccatcctcgcgcgcaatctcgacgccggc
gaagcgccgctgcgcatcctgggttccttagcctggcagtaccgccgcctctggaaagtc
aaagaccagttcgaggccggtggacgggagggcgaggcagctcgcaccctgcggatggat
ccgaccagggtgcgggagtttctgagtcggttttcccacgcgcacttgcaagccgcgttg
ccgctcttcctcgaaaccgacgggcttttgaagggcgggagtcagagccatcccagaatc
gtgatggagcggctgctgctgcgcctgtgcgacgcggcgacacaggctcccccggggccg
tccggacggcgtccgaacgtcggcgggcgcggtcagacgcggagcctgcccaatgtgcgg
acgattacgagcgcggggcggacagggcgttga
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