Neisseria meningitidis 510612 (serogroup A): NMA510612_0089
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Entry
NMA510612_0089 CDS
T03438
Symbol
rne
Name
(GenBank) ribonuclease E (RNase E)
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
nmx
Neisseria meningitidis 510612 (serogroup A)
Pathway
nmx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NMA510612_0089 (rne)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmx03019
]
NMA510612_0089 (rne)
03009 Ribosome biogenesis [BR:
nmx03009
]
NMA510612_0089 (rne)
Enzymes [BR:
nmx01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
NMA510612_0089 (rne)
Messenger RNA biogenesis [BR:
nmx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NMA510612_0089 (rne)
Ribosome biogenesis [BR:
nmx03009
]
Prokaryotic type
rRNA processing factors
NMA510612_0089 (rne)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
Zn_ribbon_InsA
Motif
Other DBs
NCBI-ProteinID:
AHW74417
UniProt:
X5F3D9
LinkDB
All DBs
Position
68912..71662
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AA seq
916 aa
AA seq
DB search
MLFNATQAEELRVAIVDGQNLLDLDIETLGKEQRKGNIYKGIITRIEPSLEACFVDYGTD
RHGFLPFKEVSRSYFQDYEGGRARIQDVLKEGMEVIVQVEKDERGNKGAALTTFISLAGR
YLVLMPNNPRGGGVSRRIEGEERQELKAAMAQLDIPNGMSIIARTAGIGRSAEELEWDLN
YLKQLWQAIEEAGKAHHDPYLLFMESSLLIRAIRDYFRPDIGEILVDNQEVYDQVAEFMS
YVMPGNIGRLKLYEDHTPLFSRFQIEHQIESAFSRSVSLPSGGAIVIDHTEALVSIDVNS
ARATRGADIEDTAFKTNMEAAEEVARQMRLRDLGGLVVIDFIDMENPKHQRDVENVLRDA
LKKDRARVQMGKLSRFGLLELSRQRLKPALGESSHVACPRCAGTGVIRGIESTALHVLRI
IQEEAMKDNTGEVRAQVPVDVATFLLNEKRAELFAMEERLDVNVVLIPNIHLENPHYEIN
RIRTDDVEEDGEPSYKRVAEPEEDESAKPFGGEKAKAARPEPAVKGVRHTSPAPTAAPEK
KTSWWDSFKAWLKRIFGGSETQAAPAAETSEKRSTANRSGSRANNRRQNPRRSKREGSKV
EVREVAGKTAGQEARADKAETRNNGNRRRNERGDRAAGRADEAEIQDRNIQPAATVADAA
PSETEVQTGKRRRNGSRSERGQTAPETATVAETTVQTAENTPSEPHTAEDKGSKPKSERN
RRERDSRDAKERRERNNQRDRRQNGKKHNIPSAAKIEQYLNIHDTADKVRSAAAHVFGET
DANAPITVSIADPVAERDLPTASPAVSNGDAPVYDAAEKIRRATAAILPEGATPKAEAQE
MPSENATFTAAAEQARETAQTGGLVLIETDPAALKAWAAQPEVQAGRGLRRSEQPKPSEA
ATVPAEEMIQVETRQG
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgttattcaacgcaacgcaggccgaagagctgcgcgttgccatcgtcgacggacaaaac
ctgctggatttggacatcgaaacgctgggcaaagaacagcgcaaaggcaatatctacaaa
ggcatcattacccgcatcgagccgtcgctggaagcgtgtttcgtggattacggaaccgac
cgccacggcttcttgccgtttaaagaagtctcccgctcatacttccaagactacgaaggc
ggacgcgcgcgcatccaagacgtgctcaaagaaggcatggaagtcatcgtccaagtcgaa
aaagacgagcgcggcaacaaaggcgcggcgctgaccaccttcatcagcctcgccggacgc
tatctggtattgatgccgaacaacccgcgcggcggcggcgtatcccgccgtatcgaaggc
gaagaacgtcaagaactcaaagccgctatggcgcaactcgacattccgaacggcatgagc
atcatcgcccgtaccgccggcatcggccgcagcgcggaagagttggaatgggatttgaac
tatctcaaacaactctggcaggcgattgaagaagcaggaaaagcgcatcacgacccttac
ctgctctttatggaaagctcgctgctcatccgcgccatccgcgactatttccgccccgac
atcggcgaaattctggtggacaatcaagaagtttacgaccaagttgccgagttcatgagc
tacgtcatgccgggcaatataggccgtctgaaactctacgaagaccacacgccgctgttt
tcccgcttccaaatcgaacaccaaatcgaaagcgcgttttcgcgcagcgtcagcctgccc
tccggcggcgcgatcgtcatcgaccataccgaagccctcgtctccatcgacgtgaactcc
gcacgcgccactcgcggcgcagacattgaagacaccgcgttcaaaaccaatatggaagcc
gccgaagaagtcgcccgacaaatgcgcctgcgcgacttgggcggcttggtcgtcatcgac
ttcatcgacatggaaaaccccaaacaccagcgcgatgtggaaaacgtcctgcgcgacgcg
ctcaaaaaagaccgcgcccgcgtacagatgggcaaactctcccgtttcggacttttagaa
ttgagccgccaacgtttgaaaccggctttgggcgaaagcagccacgtcgcctgtccgcgc
tgcgccggcaccggcgtgattcggggcatcgaatccaccgccctgcacgttttgcgcatc
attcaagaagaagcaatgaaagacaacaccggagaagtgcgcgcacaagtgcccgtcgat
gtcgccaccttcctgctgaacgaaaaacgcgccgagctgtttgcgatggaagagcgtttg
gatgtcaacgtcgtcctgattccgaacatccacctcgaaaatccgcactacgaaatcaac
cgcatccgcaccgacgacgtagaagaagacggcgaaccgagctacaaacgcgtcgccgag
cctgaagaagacgaatccgccaaaccgttcggcggcgaaaaagccaaagccgcccgtccc
gaacccgccgtcaaaggcgtgcgccacaccagccccgccccgactgccgcccccgagaaa
aaaacctcttggtgggacagcttcaaagcttggctcaaacgcattttcggcggcagcgaa
acccaagccgcgcccgctgccgaaacctccgaaaaacgcagcacggcaaaccgcagcggc
agccgcgccaacaaccgccgccaaaacccgcgccgcagcaaacgcgaaggcagcaaagta
gaagtccgcgaagtggcaggcaaaactgccggacaggaagcgcgtgccgacaaagccgaa
acgcgcaacaacggcaaccgccgccgcaacgaacgcggcgaccgtgccgccggacgcgcc
gacgaagcggaaatccaagaccgcaacatacagcctgccgcaaccgttgcagatgccgca
ccgtccgaaaccgaagtgcaaaccggaaaacgccgccgcaacggcagccgcagcgaacgc
ggccaaaccgcgccggaaaccgccaccgttgccgaaacaaccgttcagacagcggaaaac
acgccgtccgaaccgcataccgcagaagacaaaggcagcaagcccaaatccgaacgcaac
cgccgcgaacgcgacagccgagatgccaaagaacgccgcgagcgcaacaatcagcgcgac
cgccgtcaaaacggcaaaaaacacaatattccgtctgccgccaaaatcgagcagtacctg
aatattcacgacaccgccgacaaagtccgttccgccgccgcgcacgttttcggcgaaacc
gacgcaaacgcgccgattaccgtcagcattgccgatccggttgcagaaagggatcttccg
acagcatctcccgccgtttcaaacggcgacgcaccggtttatgatgcggcggaaaaaatc
cgccgtgccaccgccgccatcctgcccgaaggcgcgacaccgaaagccgaagcacaggaa
atgccgtctgaaaacgcaacctttacggctgcggcggaacaggcacgggaaaccgcacaa
accggcggactcgtcctgatcgaaaccgaccctgccgcattgaaggcatgggcggcacaa
cccgaagtccaagccggacgcggtttgcgccgttccgaacagcccaagccgtctgaagcc
gcaaccgtccctgccgaagaaatgatccaagtcgaaacccggcaaggctga
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