Neisseria meningitidis 510612 (serogroup A): NMA510612_0467
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Entry
NMA510612_0467 CDS
T03438
Symbol
hrpA1
Name
(GenBank) DNA helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
nmx
Neisseria meningitidis 510612 (serogroup A)
Brite
KEGG Orthology (KO) [BR:
nmx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmx03019
]
NMA510612_0467 (hrpA1)
Enzymes [BR:
nmx01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
NMA510612_0467 (hrpA1)
Messenger RNA biogenesis [BR:
nmx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
NMA510612_0467 (hrpA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
HA2_C
HA2_N
TraI_middle
WH_GTF3C1_N
zf_C2H2_ZNF598
Motif
Other DBs
NCBI-ProteinID:
AHW74772
UniProt:
X5F4E1
LinkDB
All DBs
Position
complement(403562..406687)
Genome browser
AA seq
1041 aa
AA seq
DB search
MQNMKNQVRGSGMDARSNPANVSDGLQNSSGHIGTNTRYRLTKLGEQMARLPIDPKIARI
LLAAKKHDCMAEILMIASALSIQDPRERPLEARDAAAKAHERFTDKQSDFLAYLNIWDSF
QRERDKGLSNKQLVQWCRQYFLSHLRMREWRELHHQLAQTAIEMGLTTKEAAFRRLSEIK
QLTSSENQGDQDLSAKRKQKQLDKKQHRAQIRAAKEAGYEQIHRALLTGLIANVGMKSPD
GNDYTGARGSRFHLFPASALFKAKPKWVMAAELVETTKLYARDVAVIQPEWIEQEAPHLV
RYHYFEPHWEQKRGEVVASERVTLYGLTVLPRRPVPYGKVAPEEAREIFIRSALVAQECD
LKADFFVHNKKLIKEITELEHKSRKQDVLVDDEALFAFYHERLPDFYTADAVSDGLRPAN
PQQTAPSYAREERREGKTVAAQTNFSATAANPLPNPLPQEREQSAAASAVSNDLHPANPQ
QTAPSPVGEGRGEGKTVASQTNFSATTANPLPNPLPQEGEQSAAASAVSNDPKPKKQPAP
PKGRLKPLPLADIRTFQAWLKTAKRDNPRLLFLSRDDLMQHAAAHITEEQFPKFWQTADG
KFKLSYRFEPHHPLDGVTMTVPLTVLNRLHAPSLEWLVPGMLREKIQLLIKALPKQIRRI
CVPVPDFITKFLESNPDRQAVIIPQLAHFIAKSAGDMRIFEQIDQDAWAAQELPEHCYLN
LLIIDDGGQELAGGRKLHELQQQLGQAAAVTFRDNTQEFERDNVTTWDIGTLPESIKFAR
GKQQLTGYLGLQKEKDGRIALRLCDTTEAAEQAHRQGVIELMKLQLKEQVKDLNKGIQGF
TQAAMLLKHINADTLRDDLTQAVCDRAFIGEDELPRNEKAFKEQIKRARSRLPAVKEALS
RYLQETAAAYAELNGKLGKHPLTHLLRLRLQTLLAAGFATRTPWAQWPRLPIYLKAMTLR
LEKYSSNPARDAAREADIQELEQMWQEKNDGLVKQGLPVSDDLTAFKWMIEELRVSLFAQ
ELKTPYPVSVKRLLKEWEDLN
NT seq
3126 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatatgaaaaaccaagtacgcggatcaggcatggatgcacgatccaatccggcc
aatgtttcagacggcctgcaaaacagttcgggtcatatcggtaccaacacgcgttaccgc
ctgaccaaactcggcgaacaaatggcgcgcctgcccatcgacccgaaaatcgcgcgcatt
ttgttggcggcgaagaagcacgactgcatggcggaaatattgatgatcgcgtccgcgctg
tcgattcaagacccgcgcgagcggccgctggaagcgcgcgatgccgccgccaaggcgcac
gagcgttttaccgacaagcaatctgactttcttgcctatctgaacatttgggacagcttc
cagcgcgagcgcgacaagggcttgtccaacaagcagttggtgcagtggtgccgtcaatat
ttcctgtcgcacctgcggatgcgcgagtggcgcgagctgcaccaccagcttgcccaaacc
gcgattgaaatgggtttgaccaccaaggaagcggctttcagacgactttccgaaatcaag
cagcttacgtcgtctgaaaaccaaggcgatcaagacttatccgccaaacgcaaacaaaaa
caactggataagaaacaacaccgcgcccaaatccgcgccgccaaagaagcgggctacgaa
caaatccaccgcgccctgctcaccggccttatcgccaacgtcggcatgaaatcgcccgac
ggcaacgactataccggcgcgcgcggcagccgtttccaccttttccccgcctccgccctg
ttcaaagccaaacccaaatgggtgatggcggcagaactcgttgaaacgacaaaactttat
gcgcgcgacgtcgccgttatccagcccgaatggattgagcaggaagccccgcacctcgtc
cgctaccactatttcgagccgcactgggaacaaaaacgcggcgaagtcgtcgccagcgaa
cgcgtgacgctttacggcctgaccgtattgccgcgccgccccgtgccttacggcaaagtt
gcgcccgaagaagcacgtgaaatctttatccgcagcgcgttggtggcgcaggaatgcgat
ttgaaagcggatttttttgtccacaataaaaagctgattaaagaaattaccgaactcgaa
cacaaatcgcgcaagcaagacgtattggtcgacgacgaagccctgtttgcgttttatcac
gaacggctgcccgatttttatacggcggatgcggtttcagacggtctgcgtcctgcaaat
ccccagcaaactgccccctcctacgcgagggaagaacggagagagggcaaaacagttgcc
gcacaaaccaacttctccgcaaccgcagcaaaccctctccctaaccctctcccacaggag
agggagcagagtgccgcagcttcagcggtttcaaacgacctgcatcctgcaaatccccaa
caaaccgccccctcccccgtgggggagggtcggggagagggcaaaacagttgcctctcaa
accaacttctccgcaaccacagcaaaccctctccctaaccctctcccacaggagggggaa
cagagtgccgcagcttcagcggtttcaaacgaccccaaacccaaaaagcagcctgcaccc
ccaaaaggccgtctgaaacccctccccctcgccgacatccgtaccttccaagcctggctc
aaaaccgccaagcgcgacaatccgcgcctgctgttcctcagccgcgacgatttgatgcaa
cacgctgccgcgcacattaccgaagagcaattccccaaattctggcaaaccgcagacggt
aagttcaaactttcctaccgcttcgagccgcaccatccgctcgacggtgtaaccatgacc
gtgccgctgaccgtcctcaaccgcctgcacgcgccgtcgctcgaatggctggtgcccggt
atgttgcgcgaaaaaatccagctgctgattaaagccctaccgaagcaaatccgccgcatt
tgcgtgcccgtacccgatttcatcaccaaatttctcgaaagcaatcccgaccgccaagcg
gtcattattccccagttggcgcactttatcgccaaaagcgcaggcgatatgcggattttc
gagcaaatcgaccaagacgcatgggcggcgcaagaattgcccgaacactgctatctgaat
ctgctcatcatcgacgacggcggacaagagcttgccggcggccgcaaactgcacgaattg
caacaacagctcggccaagccgccgccgtcaccttccgcgacaacacccaagaattcgag
cgcgacaacgttaccacatgggatatcggtaccctgcccgaatccatcaaattcgcccgc
ggcaaacaacagctcaccggctacctcggtctgcaaaaagaaaaagacggccgcatcgcc
ctgcgcctgtgtgacaccaccgaagctgccgaacaggcacaccgtcaaggcgtcatcgaa
ttgatgaagctgcaattaaaagagcaggtaaaagacctgaacaaaggcatccaaggcttt
acccaagccgccatgctgctcaaacacatcaacgccgacaccctgcgcgacgacctcacc
caagccgtttgtgaccgcgcctttatcggcgaagacgagctgccgcgcaacgaaaaagcc
ttcaaagaacaaatcaaacgcgcccgcagccgcctgcccgccgtcaaagaagccctcagc
cgctacctgcaggaaaccgccgccgcctacgccgaactgaacggcaaactcggcaaacac
ccattgacccaccttctaagactacgcctgcaaaccctgctcgccgccggcttcgccacc
cgcaccccgtgggcacaatggccgcgcctccccatctacctcaaagccatgaccctgcgc
ctcgaaaaatacagcagcaaccccgcccgcgacgcagcccgcgaagccgatatacaggaa
ttggaacaaatgtggcaggaaaaaaacgacggtttggtgaaacaaggactacccgtttca
gacgacctcaccgcgtttaaatggatgatcgaagaattgagggtgtcgctgttcgcgcag
gaattgaagacaccgtatccggtgtcggtgaagcggctgttgaaagagtgggaggatctt
aattaa
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