Nosocomiicoccus massiliensis: CJ229_000760
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Entry
CJ229_000760 CDS
T09499
Name
(GenBank) PolC-type DNA polymerase III
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
nmy
Nosocomiicoccus massiliensis
Pathway
nmy03030
DNA replication
nmy03430
Mismatch repair
nmy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nmy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CJ229_000760
03430 Mismatch repair
CJ229_000760
03440 Homologous recombination
CJ229_000760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmy03032
]
CJ229_000760
03400 DNA repair and recombination proteins [BR:
nmy03400
]
CJ229_000760
Enzymes [BR:
nmy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CJ229_000760
DNA replication proteins [BR:
nmy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CJ229_000760
DNA repair and recombination proteins [BR:
nmy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CJ229_000760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NI
HHH_6
tRNA_anti-codon
HHH_3
SSB
DNA_pol3_a_NII
Motif
Other DBs
NCBI-ProteinID:
WOS96305
UniProt:
A0AAF1BNJ7
LinkDB
All DBs
Position
148027..152289
Genome browser
AA seq
1420 aa
AA seq
DB search
MDYNRQFNILLQQANIEDNEQLTGGELRKVIVDDKTREWEFHIHFETLIDYAVFAFLKQK
VEETFRNIATVRLRVHANEFKERDIYEYLKEALENIEVTENFKRQINNSKIMYNDDTLKF
SFTSDVTKEYFERKIKNNLILEYRSYGILISDIVADVDFDAQTKNDEKLDQKITNHTEKL
LEQHKKEKEKEVSKPKEIVKQIGKKLTFDGVRKMYTIEDEEYNVRLEGVIFSKDVIHTRT
GKQILNMKITDYTDSIQVKRFGNKEEETNVFEALNKGDWVIVEGNIEYDDFAKDLVMNLR
ALTITKPPKHEDDSEEKRVELHLHTMMSAMDGVTTIEDYIDRAVEYGHPALAITDHNNVQ
AFPNAYNYAKSKGLKMLFGMEANIVEDSAKLAFKDSPVRLEDATYVVFDVETTGLSSRYD
KIIELAAVKVHNGEIIDRYESFINPHEPLSEVIKNLTGITDSMLENEREFEDVLPEFREW
VGDAIYVAHNATFDMGFIDTAFTKLGFGPSDNPVIDTLEITRVLNKDLKRHNLAALAKHY
NVELVSHHRAIYDAEATGFIFIKMLAQLKNAGIATHQDINTLARDDAFKLSKPSHATILV
KNQIGLKNLFKIVSDSLTDSFYQVPRVRKHFLDAHREGLIIGSACDNGEVFRTLLEKSYD
DALKKARYYDYLEVFPKDLYVHLYERELIRDDDMYEELIHNMIKIGDELSIPVVATGNVH
YLDKKDKIRREIIIKGNPGNPLSRQTLPEAHFRTTTEMLEDFSFLGDELSRKIVIENTNE
ISRSIDEVEVIKNGLFTPEIENANEEVKELTYSTAKEIYGDPLPEIIEARLEKELNSIIS
NGFGVVYLISQKLVKKSLDDGYLVGSRGSVGSSLVATMMGITEVNPMPPHYICPKCKHSE
FFDDGKYNSGFDLPDKKCEKCNVEFIKEGQDIPFETFLGFKGDKVPDIDLNFSGEYQATA
HNYTKELFGVDYVYRAGTISTLADKTAFGYVNGYMNDHGLHKRKAEIDRLSSESEGIKRT
TGQHPGGIIVIPDSMDVFDFTPIQYPADDTSSEWRTTHFDFHSIDENVLKLDILGHVDPT
MIRMLEDLTGVDPKTIRIDDEDTMKLFEGPEVLGVSRDDIMSNTGTYGVPEFGTPFVREM
LEDTKPNTFGELVQISGLSHGTDVWLGNAQDLIRKGICDISTVIGCRDDIMVTLMYKGLE
PSLAFKIMESVRKGRGLQPEWIEAMKANGVEDWYIDSCLKIKYMFPKAHAAAYVLMAVRI
AYFKVHYPKEYYATYLSVRAADFDLMTMTKDKSTIRTRVKEMKDNYNELTKKEKDLLIVL
EIVNEMRHRDINMLPVNIEKSHPEHFIIEGDALIPPFTAVPGLGLSVARNIAEVRKHDHF
ISKEDLNKKAGVSQKVIDYLTELGSLDHLPDKAQLSIFDL
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
gtggattacaaccggcaatttaacatactcttacaacaggcaaatatagaagacaatgaa
cagttaactggcggggaacttagaaaagtaatcgtcgacgacaaaacgcgtgaatgggag
tttcatatacattttgagacgctgatcgattacgcggtatttgcgtttttaaagcaaaaa
gtcgaagagacgtttcgaaatatcgcaacggttcgcttaagagtacatgctaatgaattc
aaagagcgagacatttacgagtatttaaaagaagcgctagaaaatatcgaagtgactgaa
aactttaagcgccaaattaacaattcgaaaattatgtataacgacgacactttaaaattt
agttttacgagtgacgttactaaagaatattttgaacgaaaaattaaaaacaatttaatt
ttagaatatcgttcatatggcatcctcatctcagacatcgtggcagatgtagattttgat
gcacaaacaaaaaacgatgaaaaactcgatcaaaaaattacgaatcatacagaaaaatta
ttagaacaacataaaaaagagaaagaaaaagaagtatcgaagcctaaagaaatcgttaag
caaatcggtaaaaaacttacgtttgatggcgtaagaaagatgtatacgatcgaagatgaa
gaatataacgtccgattagaaggtgtaattttcagtaaagacgtgatacatacacgtact
ggaaagcaaattttaaatatgaaaattaccgactacacggatagcattcaagtgaaacgt
ttcggtaacaaagaagaagaaactaacgtattcgaagcgctgaataaaggggactgggta
atcgtcgaaggaaatattgagtacgatgacttcgcaaaagaccttgtcatgaatttacgt
gcgttaacgattactaaaccacctaaacatgaagatgatagtgaagagaagcgtgtcgaa
cttcatcttcatacgatgatgagtgcgatggacggtgtgacgacaatagaagattatatt
gaccgcgcggttgaatacggacatcctgcacttgctataacagaccataacaacgttcaa
gcattcccgaacgcatataattatgctaaaagtaaaggtttaaaaatgctctttggtatg
gaagcaaacatcgtcgaagatagtgcgaaactcgcatttaaagatagtccagtgcgttta
gaagacgcgacgtacgtcgtatttgacgttgagacgacagggttatctagtagatacgat
aaaattatcgaactcgcagcagttaaagtacataacggtgaaatcatcgaccgttatgaa
agctttattaatccgcatgaaccgttatcagaggtcattaaaaacttaacaggtattaca
gattcgatgttagaaaacgaacgtgaatttgaagatgttctccctgaatttagagagtgg
gtcggggatgcgatatatgtcgcacataacgcgacgtttgacatgggcttcattgatacg
gcgttcactaagcttgggtttggtccgtcagataaccctgtcatcgacacgttagagatt
acgagagtactcaataaagacttaaaacgtcataacttagcagcacttgctaaacattat
aacgtcgaactcgtcagtcaccatagagcgatctacgacgcagaagcgacaggttttata
tttataaagatgttagcgcagttaaagaatgcgggcattgccacacatcaggatattaat
acgctcgctagagatgatgcgtttaagttaagtaaaccgagccacgcgacaattttagtt
aaaaaccaaatcggtttaaaaaacttatttaaaattgtttcagatagtttaacagatagt
ttttaccaagtaccgcgagtgagaaagcactttttagacgctcaccgtgaagggttaatt
atcggaagtgcgtgtgataacggagaagtgtttcgaacgttattagaaaagtcatatgac
gatgcacttaaaaaagcacgttactatgactatttagaagtgttcccgaaagacttatat
gttcatctctatgaacgcgagttaattcgagatgacgatatgtacgaagaactcattcat
aacatgattaaaatcggagacgaattatcgattccagtcgtcgcgacaggaaacgttcat
tatctcgataaaaaagataaaattcgtcgcgaaattatcattaaaggaaaccctgggaat
ccgttatcccgacaaacgttaccggaagctcattttagaacgacgactgaaatgcttgag
gacttttcgtttttaggtgacgaactttcacgaaaaattgtcattgaaaatacgaacgaa
attagtcgttcgattgacgaagtcgaagtcattaaaaacggattattcacaccagaaatt
gaaaatgcaaacgaagaagttaaggagttaacgtattcaacagcaaaagagatttacggt
gatccattaccagaaatcatcgaagcacgtttagaaaaagagttaaacagtattatctca
aacggatttggcgtcgtgtacctaatctcacaaaagctcgttaaaaaatcactcgatgac
ggctacttagtaggtagtcgtggttcagttggttcaagtttagtcgcgacgatgatgggg
attactgaagttaacccaatgccgccgcactatatttgtccgaagtgtaagcatagtgag
tttttcgacgatggtaaatataactcaggatttgacttacccgacaaaaaatgtgagaag
tgtaatgtcgaattcattaaagaaggtcaggatattccgtttgaaacgtttttaggattt
aaaggggataaagttccagatatcgatttaaactttagtggagaatatcaagcgacagca
cataactacacgaaagaactattcggtgtagactacgtctaccgtgcaggaacgatttct
acactcgcagataagactgcattcggatacgtgaatggatatatgaatgatcacggactt
cataaacgtaaagcagaaatcgatagactatcaagcgaaagtgaagggattaaacgtacg
acaggtcagcacccagggggaattatcgttatcccggattctatggacgtctttgatttt
acgccaattcaatatccagcagacgatacgtcgagtgaatggcgtacgacacactttgac
ttccatagtatcgacgaaaacgtcttaaaactcgatatccttggtcacgttgatccgacg
atgattcgtatgctcgaagatttaacaggcgtggatccgaagacgattcgaatcgacgac
gaagatacgatgaaactatttgaaggtccagaagtactcggtgtaagtcgagatgacatt
atgagtaatactggaacgtacggcgtacctgaattcggaacaccttttgttcgtgaaatg
ttagaagatacaaaaccaaatacatttggtgagctcgttcaaatctcgggattatcacac
ggtacagacgtttggctaggaaatgcgcaggatttaatccgaaaaggaatttgtgacatt
tcaacagttatcgggtgtcgtgacgatataatggttactttaatgtataaaggactcgag
ccgagtttagcgtttaaaattatggagagtgtacgtaaaggacgcggacttcaaccagag
tggattgaagcgatgaaagcaaatggggtagaagattggtatatcgattcttgcttaaaa
attaagtacatgttcccgaaagcacacgcagcagcgtacgtacttatggcagtaagaatt
gcgtactttaaagtgcattatcctaaagaatattacgcgacatatttaagtgtacgtgca
gctgactttgatttaatgacgatgacaaaagacaagtcgacaattcgtacgcgcgtaaaa
gagatgaaagacaactataatgagttaacgaaaaaagaaaaagacttattaatcgtttta
gaaattgtgaatgagatgagacatcgtgatattaatatgttaccggtcaatatcgaaaaa
tctcatccagagcacttcattatagaaggcgatgctttaatcccaccgtttactgcagta
ccaggactcgggctaagtgttgcaagaaatattgctgaagtgagaaaacatgaccacttt
ataagtaaagaagatttaaataaaaaagctggagtatcccaaaaagtgatcgattattta
acagaacttggaagtttagatcatttaccagataaagcacagctttctatattcgactta
taa
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