Nosocomiicoccus massiliensis: CJ229_001075
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Entry
CJ229_001075 CDS
T09499
Name
(GenBank) SMC family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
nmy
Nosocomiicoccus massiliensis
Brite
KEGG Orthology (KO) [BR:
nmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nmy03400
]
CJ229_001075
DNA repair and recombination proteins [BR:
nmy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CJ229_001075
Archaeal homologous recombinant proteins
CJ229_001075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcC_Walker_B
AAA_29
AAA_27
SMC_N
APG6_N
Phage_T7_55
FlaC_arch
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
WOS96366
LinkDB
All DBs
Position
217970..220960
Genome browser
AA seq
996 aa
AA seq
DB search
MKPIKLQMEFIGPYKNETIDFTRLNDSLFLISGRTGSGKSMIFDAITYALFATASTESRG
GESLRSQFASDDELSKVNLDFYHRGKQYRIERTLTYKKRTNKNPTTGQAAIYNDFGELIV
SGLQEVSKYVEELLHMSARQFRQIALLPQGEFKKLLTANTKDKEEILKTLFGTERFNDVY
KSIYKEYKDKDNRRQLLYKEIETQLLSVSKEPVLEFNTSLKSFKEKIEQDKHVLNKKKKE
IELVELDIEKLSKAIQEDEQHNERLSEFNKTNVALSELRAQSDEIKETERTLQLVNELSK
IKEVFHLEKNVTVKLRQSTKQEETLTNDLNSEEAKNELVTNEIKALKEKETVIERQREHL
SLLNKYDTAQYKNLDASILNTEEEIKESEDTLKTVNSDISLKEKELETNDASIDVLNTLK
EEKHSIQIAINDIKRDIEMQKVEEKKIKQLESFIQQKEKLSEDLAIVIKDKESIVKQFND
ISLETNEAINHLLSHLEIGQPCPVCQTVVETYPEHKEVMDAETKDRLTELMNRENECTKD
IDRLTIHIEATESNISDVKYDGDQLREDFSKLEFKLQNIDEQLKNVSEQLERKEKLMSDI
NELKDSRLKTSEALTYKNESLKNLTQTKESFIAETGLNDYTALEEKITLLTDSVNLHERS
LKEAESKRQNIELNIAKLHTELSSVKDNIESFHRDLNEYTPKVESFLNTYDTVDRTNIEA
YFKIDDEALQQTVDTFYSKVRELEIKSNTLKESLTTFEAIDVTLKEKKLKELEEQKRELQ
RVITETEYQLNSDEALIEKLTDSINTYNEDEKRVRELEVLAKIINGNSEGRNSTHPTLSR
FVLIHYLELILVYANRRLTEMTNGRYELRRKDTFNAADALIIDVFDHFNNETRNIATLSG
GETFQASLALSLSLSEVIQHEAGSINMDMLLIDEGFGTLDEETLNTAINTLVDLQTKGKM
VGIISHVEALKTRLQNIIYVETENERSMTNIVTYLS
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccaattaaattacagatggagtttatcggtccatataaaaacgaaacgattgat
ttcacacgcttaaacgactcattatttttaatatcaggtcgcacgggatctgggaaatct
atgatttttgatgcgattacgtatgcattatttgcgacagcttctacagagagtagaggt
ggtgagtctttaagaagccagtttgcaagtgatgatgaattgtcaaaagttaatttagat
ttttatcatcgtggtaaacaataccgaatcgaacgtacgttgacatacaaaaaaagaacg
aacaaaaacccaacgacaggccaagcagcaatatacaatgacttcggtgaactcatcgta
tccggattacaggaagtgtcaaaatatgtcgaagaactccttcatatgtcagcgcgacaa
tttagacaaattgcactgttaccacaaggagaatttaaaaagttactcactgcaaatacg
aaagacaaagaagaaattttaaaaacattattcggtacggaacgttttaacgacgtgtac
aaaagtatttataaagaatataaagataaagacaatagacgacaattactttataaagaa
attgaaacgcagttactatctgtttcaaaagaaccggtgttagaatttaacacgtcatta
aaatcttttaaagaaaaaattgaacaagataaacatgtgttaaataaaaagaaaaaagaa
atagagcttgttgaattagacattgaaaagttatctaaagcaattcaagaagacgagcag
cataatgaacggttatcagaatttaataaaacaaacgtagcattatctgaattgcgtgca
caatctgatgaaataaaagaaacagaacgtacattacaattagtaaatgaactgtctaaa
attaaagaagtatttcatcttgaaaaaaatgtaacggttaagctacgtcaatcaacgaaa
caagaagagactttaacgaatgatttaaacagtgaagaggcaaagaatgagttagttacg
aatgagataaaagcactaaaagaaaaagaaacagtgattgaacgtcaaagagagcatctt
tcacttttaaataagtatgatacggcgcaatataaaaatcttgatgcgtctattttaaac
actgaggaagaaataaaagagtctgaagacacacttaaaacagtaaatagtgacatctca
ttaaaagaaaaagaattagaaacgaacgacgcgagtattgatgtactgaacactttaaaa
gaagaaaaacattctattcaaatcgcgattaacgatatcaaacgagatattgaaatgcag
aaagtagaagagaagaaaataaagcagctagagtcttttattcaacaaaaagaaaagctg
tctgaagacttagctatagtcattaaagataaagaaagtatagttaaacaatttaatgat
atttcactcgaaacaaacgaagcgatcaatcatttactgtctcatttagaaattggtcag
ccgtgtccagtctgtcaaacagttgtcgaaacgtatccagaacataaagaagtgatggat
gctgaaacaaaagacaggttaactgaattaatgaatcgagaaaatgagtgcactaaagat
attgatcgtttgacgattcatatagaagcgacagagtcaaatattagtgacgttaaatat
gatggtgatcagttaagagaagacttttctaagttagaattcaaacttcaaaatattgat
gaacagcttaaaaatgtgagtgaacagttagaacgtaaagagaagttaatgagtgatatt
aacgagcttaaagattcacgattaaaaacaagtgaggcactcacatataaaaatgaatcg
ttaaaaaatcttacacaaacgaaagaatcatttattgcggagactggactaaatgattat
acagcgttagaagagaaaatcactctactaacggattctgttaatcttcatgagcgttcg
ttaaaagaagcagagtctaaacgacaaaacatcgaattaaacatcgccaaattacacaca
gagttatcatcagtcaaagataatattgaatcgtttcaccgtgatttaaatgaatataca
ccaaaagttgaatcatttttaaacacttatgacacagtagaccgaacaaatattgaagcg
tattttaaaatcgatgatgaagcgttacagcaaacagtcgatacgttttacagtaaagtg
cgcgagctagaaataaaatcaaacacgttaaaagaatccctcacaacttttgaagcaatc
gatgtcactttaaaagaaaaaaagttaaaagagttagaagagcaaaagagagagctacaa
cgcgttattacagagactgaatatcaattaaatagtgacgaggcattaatagaaaaatta
acggattctatcaacacatataacgaagacgagaaacgcgttcgcgagctcgaagtctta
gcaaaaattataaacggtaatagtgaaggtagaaattcaacccatccaacattgtcacga
tttgtgctgattcattatttagaattgattttagtttatgctaatagaagactcacagaa
atgacgaatggccgttatgaattgcgacgaaaagatacgtttaatgcggcagacgcgctc
atcatcgacgtatttgatcactttaacaacgaaacgagaaatatcgcgacactttcaggt
ggagaaacgttccaagcgagtcttgcccttagtttatcgctctctgaagtcattcaacat
gaagcaggtagcattaacatggatatgctcttaatcgacgaagggttcggaacattagat
gaagaaacacttaacactgcgattaacacgttagtcgaccttcaaacgaaaggaaagatg
gtcggaattatatcacacgttgaggcattaaaaacacgacttcaaaacattatatatgta
gaaacagaaaacgaaagaagtatgacaaatattgtaacttatttgtcataa
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