Nosocomiicoccus massiliensis: CJ229_001750
Help
Entry
CJ229_001750 CDS
T09499
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
nmy
Nosocomiicoccus massiliensis
Pathway
nmy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nmy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
CJ229_001750 (xseA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nmy03400
]
CJ229_001750 (xseA)
Enzymes [BR:
nmy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
CJ229_001750 (xseA)
DNA repair and recombination proteins [BR:
nmy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
CJ229_001750 (xseA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
MRP-S23
Motif
Other DBs
NCBI-ProteinID:
WOS96493
UniProt:
A0AAF0YIH6
LinkDB
All DBs
Position
341228..342568
Genome browser
AA seq
446 aa
AA seq
DB search
MTNEQVLTVSALSSYIEEKFVRDPYLERVFIKGEISNSKLHSSGILYFTLKDESTTLRGI
MFSNSVKRLKKVPSDGDGVIVEGRISVYKPGGYYQVIANDIVLDGQGQLYEKLEQNKKML
QAQGYFDPAHKKQLPYFPKTIILVTSATSAAYEDMIHATEKRFPLTKIKVINTLMQGEKS
IDSVINNLDYVDQLHADVVILARGGGSIEDLWTFNELEVAKKVFNMKTPIITAIGHETDT
TLVDFVSDKRATTPTQAMEHALPDQRYLKERVIESQLVLKKKIQDTLLNKQSKLESHKSY
YKFRMPTRLYDQHLQQLVYKKDQLESLYNKKYNERHHQFSHLNYKINTLSPRHIIENGQT
QNKQYRQSLTKLMQYKIEHSKLQVKNKLEILDSLNPLEILKRGYSFVSLDGHVLKSTNDV
DVGDVIQVKLSDGRLETKITEVYKDE
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgacgaacgagcaagtgctaactgtgagtgctttatcatcatatattgaagaaaaattt
gttagagacccgtacttagaacgggtctttattaaaggtgagatatctaatagtaaatta
catagttcaggtattttatatttcactttgaaagatgaatcgacaacactacgcggtatt
atgtttagtaatagtgtgaagcgactaaaaaaagttccgagtgatggggacggagtcatc
gtagaaggtaggatatctgtctacaaacccggaggatattatcaagttatcgcaaacgat
attgtactcgatggtcaaggacagttatatgaaaagttagaacaaaataaaaagatgctt
caagcgcagggttattttgatccagcacataaaaaacaacttccttattttccaaaaaca
attattttagtcacaagtgcgacaagtgctgcatatgaagacatgatacatgctactgaa
aagcgtttcccacttacaaaaataaaagtcattaatacgttaatgcaaggtgaaaagagt
atcgattctgtcattaacaacttagattatgtagatcagttacatgctgatgttgttatt
ttagcgcgtggtggtggttcaattgaagacttatggacatttaatgagttagaagttgcc
aaaaaagtatttaatatgaaaacaccaattatcactgcaattggacacgaaacagatacg
acactcgtggactttgtatctgataaaagagcgacaacaccaacgcaagcaatggagcat
gctttgcctgatcaacgatatttaaaagagagagttatcgaatcacaattagtattgaaa
aagaaaatacaagatacacttctcaacaaacaatcaaaacttgaaagccataaaagctat
tataaatttagaatgccaacacggttgtatgatcaacatttacaacaactcgtctataaa
aaagatcaattagagtcgttgtataataaaaagtataatgaaagacaccatcaatttagt
catttgaattataaaatcaatacgctcagtccacgacatattattgaaaacggacaaaca
caaaataagcaatatcgacagtcattaactaaattaatgcaatataagatagaacattct
aaattgcaagtaaaaaacaaacttgaaattttagatagtttaaatccactagaaattcta
aaacgtggatactcatttgttagtttagatggacacgtcttaaagagtacaaatgatgtg
gatgtcggagatgtaatccaagtgaaattaagtgatggtcgcttagaaacaaaaattact
gaggtgtataaagatgagtga
DBGET
integrated database retrieval system
