Nosocomiicoccus massiliensis: CJ229_002600
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Entry
CJ229_002600 CDS
T09499
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
nmy
Nosocomiicoccus massiliensis
Pathway
nmy03030
DNA replication
nmy03410
Base excision repair
nmy03420
Nucleotide excision repair
nmy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nmy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CJ229_002600 (polA)
03410 Base excision repair
CJ229_002600 (polA)
03420 Nucleotide excision repair
CJ229_002600 (polA)
03440 Homologous recombination
CJ229_002600 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmy03032
]
CJ229_002600 (polA)
03400 DNA repair and recombination proteins [BR:
nmy03400
]
CJ229_002600 (polA)
Enzymes [BR:
nmy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CJ229_002600 (polA)
DNA replication proteins [BR:
nmy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CJ229_002600 (polA)
DNA repair and recombination proteins [BR:
nmy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CJ229_002600 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CJ229_002600 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_5
DUF3913
HHH
Motif
Other DBs
NCBI-ProteinID:
WOS96651
UniProt:
A0AAF1BVR7
LinkDB
All DBs
Position
complement(509403..512000)
Genome browser
AA seq
865 aa
AA seq
DB search
MDKLILIDGNSLAFRAFYGLPLLSNQSGLHTNAIFGFQKILDKIIREENPTHFLIAFDAG
KKTFRHEKYGEYKGGRQKTPPELGEQFAPIRKLIDAYGIKRYEETNYEADDIIGSLSKLA
DENGMETIIITGDRDLTQLASEHVTIYFTKKGVTQIDKYTPEFIEEEYGLRPEQIIDMKG
LWGDTSDNIPGVPGIGEKTAIKLLKKYDSVEGVYEHIEELKGKQRENLENFKDDAFMSKE
LATIYRDMTFDFSLDDLKLPPEDIDAKIKVFKEFEFNSLLESLNESPVKNTTTFEANRVD
RLDMLGEDVSLYLESEEANYLLNEPTVLVVTDGENSYVIATEDIDKNELEEFLKTRKSVN
TYDLKRQIAFLNQLGVSFNQFTEDIMLGAFLLDPGKKIEDVSSTVEQFNIQIDSDESHYG
KGRSKKNPTIEETKDFTEKKALAIHHALPLLEQKLKDDDMFTLWKELEIPLSKVLSEMEI
KGITVDINTLKEMETELEERLDHLKSKIYEIAGEEFNINSPKQLGVVLFEHLELPVIKKT
KTGYSTAADVLEALRPQHEIIDFILEYREIQKLQSTYVIGLQGQIHEDGRIHTRFNQTLA
QTGRLSSVEPNLQNIPIRLEEGRKIRKAFVPKSEENVLLSLDYSQIELRVLASISKDEKM
IDAFKEGKDIHTTTAANVYNVDSSDVTSTMRSNAKAVNFGIVYGISDYGLSQQLGITRKE
AKAFIDTYLDTFVNVKEYMKYIVQDAKRDGYVSTLLGRRRYVPDINSRNFNARSFSERIA
MNSPIQGTAADIIKLAMVNYYESDQKDKFNAELLLQIHDELVFDIPKREVDDFVVFIKDI
MEHALEMEVPLKAEYEYGPNWYTME
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggataagttaattttaatagatggtaatagtttagcatttcgtgcattttatggactt
ccacttttaagtaaccaaagtggactgcatacgaatgctatttttggttttcaaaaaata
ttagataaaattatacgtgaagaaaatccgactcactttttaattgcgtttgacgcaggt
aaaaagacgtttagacatgaaaagtatggtgagtataaaggtggacgtcaaaagacacca
ccagaattaggagaacagtttgcgccgattcgtaaattaattgatgcatacggtattaaa
cgatacgaagaaacgaactacgaagcggatgatattatcggttcgttgtctaaattagca
gatgaaaacggcatggagacgatcattattactggcgaccgtgacttaactcaactcgca
agtgaacacgtgacgatttactttacgaaaaaaggtgtcactcaaatcgataaatatacg
ccggagtttattgaagaagaatacggtcttcgtccggaacaaattattgatatgaaaggt
ttatggggcgatacgtctgataatatcccaggtgtccctggtattggtgaaaagaccgcg
attaagctgttaaagaaatacgattcagtcgaaggtgtctacgaacatattgaagaatta
aagggtaaacagcgcgagaatttagagaactttaaagatgatgcatttatgtctaaagaa
ctcgcaacgatttatagagatatgacgtttgattttagtttagacgacttaaaacttcca
cctgaagacatcgatgcgaaaattaaagtatttaaagaatttgaattcaattcgttactt
gaaagtttaaatgagtcgcctgtaaagaatacgacgacttttgaagcaaatcgagtcgac
cgcttagacatgctcggtgaagatgtttctttatatttagagagtgaggaagcgaattac
ttattaaatgaaccgactgtactcgtagtcactgatggtgaaaatagttatgtgatagct
actgaagatatagataaaaacgaactcgaagagtttttaaagacgagaaaatcagtgaat
acgtatgacttaaaacgacaaatcgcatttttaaatcaattaggtgtttcatttaatcaa
tttacagaggatattatgctcggggcatttttacttgatcctggtaaaaaaattgaagat
gtcagttcgactgttgaacaatttaacattcaaatcgatagcgacgagtctcattacggt
aaagggcgtagtaagaaaaacccaacgattgaagagacgaaagattttacagaaaagaaa
gccttagcaatccatcatgcattaccacttttagaacaaaaactaaaagatgatgatatg
tttacgctatggaaagaattagaaattcctttatctaaagtgttatctgaaatggaaatt
aaaggaatcacagtagatattaatacgttaaaagaaatggaaacagagttagaggaacgt
ctcgatcacttaaaaagtaaaatctatgaaatcgctggagaagagtttaacatcaattca
ccgaaacagctcggtgtagtgttatttgaacatttagagttaccagtaattaaaaagacg
aagacaggttactcaacagcagcggatgtattagaagcgttacgtccacaacatgaaatt
atcgattttattttggagtatcgtgaaattcaaaaattacaatcgacgtatgtcatagga
ttacaaggacaaattcatgaagacgggcgcattcatacgagatttaaccaaacgcttgct
caaacgggacgtctatctagtgttgaaccaaacttacaaaacatcccaattcgattagaa
gaagggcgtaaaattagaaaagcgttcgtcccaaaaagtgaagagaacgtattattatca
ctcgactattcacaaatcgagttaagagtccttgcatcgatttctaaagatgaaaagatg
atcgacgcattcaaagaaggcaaggatattcacacgacgacggcagcgaacgtgtataac
gtcgactcgagtgacgttacgagcacaatgcgttcaaatgccaaagcggtaaacttcggt
atcgtgtacggtatttctgattacggattatctcaacaacttgggatcacgcgtaaagaa
gcgaaagcgtttattgatacgtatctcgatacgttcgtaaacgtgaaagagtatatgaaa
tatatcgttcaagacgcaaagcgcgacggttacgtatcgacattgcttggtcgaagacgt
tacgttccggatataaactcacgtaactttaacgcgagaagcttctcagaacgtatcgct
atgaactcaccaattcaaggaacagcagctgatattattaaacttgcgatggtgaattat
tatgagagtgaccaaaaagataagttcaatgccgaattactactacaaattcatgacgaa
cttgtctttgatattccaaaaagagaagtagatgatttcgtcgtcttcattaaagatatt
atggaacacgcattagagatggaagtaccattaaaagctgaatatgaatacggtccaaat
tggtacacaatggagtag
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