Nosocomiicoccus massiliensis: CJ229_002660
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Entry
CJ229_002660 CDS
T09499
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
nmy
Nosocomiicoccus massiliensis
Pathway
nmy03030
DNA replication
nmy03430
Mismatch repair
nmy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
nmy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CJ229_002660
03430 Mismatch repair
CJ229_002660
03440 Homologous recombination
CJ229_002660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
nmy03032
]
CJ229_002660
03400 DNA repair and recombination proteins [BR:
nmy03400
]
CJ229_002660
Enzymes [BR:
nmy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CJ229_002660
DNA replication proteins [BR:
nmy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CJ229_002660
DNA repair and recombination proteins [BR:
nmy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CJ229_002660
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
T2SSK
Motif
Other DBs
NCBI-ProteinID:
WOS96662
UniProt:
A0AAF0YNW7
LinkDB
All DBs
Position
complement(523416..526559)
Genome browser
AA seq
1047 aa
AA seq
DB search
MINLNVHSSYEFLNSNIQIDRLINILKEDDQCSVAITDFNSMHGAYEFLQKAQTNDIKPI
VGLEISIEDDFKTSDIVLYAKSLKGFYFLSKLSSRISYKKTEVIPLSFLSDITDCIAVLK
NDEGLNIFEYINIPDEDKYTAHTVNSAYKKAYIRPSYYYKKSDAAVVNVLNAIKENEKID
LQYLNESDGDDFIKLQADVAKYSDYLETNKEIVDKCDVYMPKVEYTLPKFTEGSSEELLK
DELKDAIKRKIGHMTDAYRDRLNKEYKTIVNMGFADYFLIVSDLVRYCKNNEIYVGPGRG
SSGASLVAYLLDITDIDPIEYDLLFERFLNEERVTMPDIDIDFASVDRPKVIEYLQQKYG
EMHVANILTYNNMTAKSVAREVGRIFSFNDSELKEISNIIDENNVDLEQAFNSERFNNLI
ETNVKYKLLKKYALKIENLPRNTSIHASGVLLGRNPLNEEIPIMFNETGVISQWPMEDCE
KVGLLKIDVLSLQTLSLIRYMSTRIKTRNHDFDVNKIPLDDKKTFRLLSAGMTAGIFQLE
SDGITKVIERYKPNSLLDLALVLAMYRPGPMEQIDHIIDIKHSSKKVVYPHDDLKEILKD
TYGVMIFQEQIMQTTRKIAGFSLQEADITRRAMAKKNRDELMREKSKFIEGAERNHYSRE
VSEHLFDLILKFADYGFPKSHALVYALITYRMAYIKAHFPEEFYAVMLLDHKTKEEKLAN
TLRELKRLKVQIKRPSIHESFYNNTSKDGLRLGFSMIKYITKDISNAIVEARKEKQFEDV
YDFVSRMNQLGIRLNERQLRALILSGAFDDFNRSRKSLLQQSKKALDSIKDGVDQINLLD
MVLGLTIIRPEDEDVEEMAQQELIDGEIEMLGFNISEHPIITKHNDVQYIPFSLLDHKSN
KQRGIFLVSILSVRQIRTKKNDDMAYVSITDGHTEMDAVLFPKDYMINLSKLQQDILVID
GRMDEYRGKKQLIISRVYIVDDFIRNYIKDTKYVYVRNYEDTQFKKLLSSEGIPVFDMEQ
TKLGHMQHNNLNRLINLLGKENVRFMK
NT seq
3144 nt
NT seq
+upstream
nt +downstream
nt
atgatcaatttaaatgtgcatagtagctatgaatttttaaatagtaatattcaaattgat
cgccttataaatattttaaaagaagacgaccagtgttctgttgcgattacggacttcaat
agtatgcacggtgcatatgagtttttacaaaaagcacagacaaatgatataaaacctatc
gttggactagagattagtatagaagatgattttaagacgagcgatattgtgttgtatgca
aaaagtttaaaaggtttttattttctatctaaactatcttctagaattagttataaaaaa
actgaagtcattccattatcatttctaagcgatattacagactgtattgcggttcttaaa
aatgatgaaggacttaacatctttgaatatataaacatccctgacgaggataaatatact
gcccatactgttaatagtgcgtataaaaaagcctacattcgtccgagctattactataaa
aaaagtgatgctgcagtcgttaacgtattaaatgccattaaagaaaatgaaaaaatagac
ttacagtatttaaacgaatcagacggtgacgactttattaaactacaagcggatgtcgct
aaatatagtgattacttagaaacgaacaaagaaatcgtcgataaatgtgacgtctatatg
ccaaaagtcgaatatacactaccgaagtttacggaaggttcaagtgaagagttattaaaa
gatgaattaaaagatgcgataaaacgtaaaattggtcatatgacagacgcctaccgtgac
cgattaaataaagaatataaaacaatcgtcaacatgggattcgcagattattttttaatc
gtttcagatctcgtcagatattgtaaaaataatgaaatttatgtcggtccaggtcgtgga
tcatctggggcgagtttagtcgcgtatttactcgatattactgacattgatccgattgag
tacgatttactatttgaacgatttttaaacgaagagcgtgtcacgatgccagatatcgat
atcgactttgcatctgtcgatcgtccgaaagtaatcgagtatttacagcaaaaatacggc
gaaatgcacgttgcgaacattttaacttataacaatatgacagctaaaagtgttgcgcgt
gaagtggggcgtatatttagctttaatgacagtgaactaaaagaaatatcaaacattatc
gatgaaaataatgttgacctggaacaagcgtttaactctgaaaggtttaacaacttaatt
gaaacaaatgttaaatataagctgttaaaaaaatacgcattaaaaatagaaaacttacca
cgaaacacttcaattcatgcaagtggggtactgcttggtagaaatcctttaaacgaagaa
ataccaatcatgtttaatgaaacaggtgtcataagtcagtggccgatggaagactgtgaa
aaggtcgggcttttaaaaatcgacgtcttaagtttacagacgctatcgttaattcgctat
atgagtacccgtatcaaaacacgtaatcacgattttgacgtaaataaaatacctttagac
gataaaaaaacatttcgactattatctgctggaatgacggctggtatattccaattagaa
tctgatggaattacgaaagtaatcgagcgatacaaaccaaatagtttactcgatcttgcg
ctcgttcttgcgatgtacagaccaggtccgatggaacaaatcgaccatatcatcgacatt
aaacattcttcaaaaaaggtcgtttatccgcatgatgatttaaaagaaattttaaaagat
acgtacggagtcatgatatttcaggagcaaattatgcagacgactcgaaaaattgcaggg
tttagtttgcaagaagcggatattacacgacgcgcgatggcgaaaaagaaccgcgacgag
ttaatgcgtgaaaaaagtaagttcattgaaggcgctgagaggaatcactatagccgtgaa
gtgagtgaacacttatttgatttaattttaaaattcgcagattacggttttccaaaaagt
cacgcgctcgtctatgcgttaattacgtacagaatggcgtatataaaagcacatttcccg
gaagagttttatgcggtcatgctgcttgaccataagacgaaagaagaaaaacttgcaaat
acgttacgtgagttaaaacgattaaaggttcaaataaaacgaccaagtattcatgagtcg
ttttataacaatacgagcaaagacggattacgtctcggattttcgatgattaaatatata
acgaaagatatctcaaatgcaattgttgaagcaagaaaagagaaacagtttgaagacgtg
tacgattttgtatcacgcatgaatcagttaggtataagattaaacgaaagacaacttcgc
gctttaattctttcaggtgcgttcgatgactttaatcgctcgagaaagtcgttattacaa
caatctaaaaaagcattagattccattaaggatggcgtagaccaaattaatttactcgac
atggtgctcggtttaacaataattcgccctgaggatgaagacgtcgaagaaatggcccaa
caagaactcatcgatggagaaatcgaaatgcttggatttaatatttcagagcatccaatc
attacaaaacataatgatgttcaatatattccgttttcattactcgatcataagtctaat
aaacaacgaggtatttttctcgtttctatacttagtgtgagacaaataagaacgaagaaa
aatgacgacatggcttacgtatcaatcacagacgggcatactgaaatggatgcggtactt
ttcccgaaagactatatgatcaacttatcaaaacttcaacaagatatactcgtaatcgac
ggtcggatggatgagtacagaggtaaaaaacaattaatcatctctagggtttatatagtg
gatgattttataagaaattatattaaagatacgaagtatgtctatgtaagaaattacgaa
gatacgcagtttaaaaagctgttatcatcggaaggaattccagtttttgatatggaacaa
acgaaacttggacacatgcaacataacaatttaaatcgacttattaatctgttaggaaaa
gaaaatgtacgttttatgaaatga
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