Nosocomiicoccus massiliensis: CJ229_004115
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Entry
CJ229_004115 CDS
T09499
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
nmy
Nosocomiicoccus massiliensis
Pathway
nmy03420
Nucleotide excision repair
nmy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
nmy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CJ229_004115 (pcrA)
03430 Mismatch repair
CJ229_004115 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nmy03400
]
CJ229_004115 (pcrA)
Enzymes [BR:
nmy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CJ229_004115 (pcrA)
DNA repair and recombination proteins [BR:
nmy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CJ229_004115 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
CJ229_004115 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
Viral_helicase1
UvrD_C_2
AAA_12
AAA_30
AAA_11
DEAD
ResIII
GT-D-like
GpA_ATPase
MIP-T3
Motif
Other DBs
NCBI-ProteinID:
WOS96900
UniProt:
A0AAF0YK54
LinkDB
All DBs
Position
complement(770089..772254)
Genome browser
AA seq
721 aa
AA seq
DB search
MDLSLMNRAQYEAITTTEGPVLVMAGAGSGKTRVLTHRIAYLIEEKDVPSYNILAITFTN
KAAKEMKERVDKLIDDDTSKMWISTFHAMCVRILRRDIDKLGYDRSFSILDTTDQLNVVK
DVLKSMNIDQKQYPPRQFLNAISNFKNALITEKEAKENAYDFREKLNADIYTSYQEILYR
NSALDFDDLIMLTIQLFQKDEAILNYYQTKFQYIHVDEYQDTNHAQYQLVYMLSQKYENI
CVVGDSDQSIYKFRGADIMNILNFEKDYDNVKTILLEENYRSHQRILDAANNVIENNTSR
VPKNLVTSRGKGEKITSIVSQNEREEGQRVVKQIQKLKNEGYRFNDMAVLYRANSQSRAI
EDALVKSSLPYNMVGGMKFYQRKEIKDLMSYMKVVLNIHDDIAMERIINTPKRGIGPKTI
DTLKQHANALNSSIYDAIKDADFIGLSKKNAENLAQLLSVLENLKEKSKFMSITDLVDEI
LHDTGYLNMLIRENTLESNSRIENLEEFKTVTKEFDETHTIGDELLFDFLSDMALVSDQD
SVDDTDAVTLMTIHASKGLEFKVIFIVGLEEGLFPSYRSMDTEEELEEERRLMYVAITRA
MERLIISRATSRTIFGRTNNAMESQFWSEIPADLVEGESLISVYDGRSSNSKKRPRSKSQ
VFTDNSGVTFNVGDKVTHKTFGDGMITAINGSGDSEELDIVFSKVGPKRLLAKFAPIEKK
G
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggatttatctttaatgaaccgagcgcaatatgaagcaattacgacaacagaaggccct
gtcctcgttatggcgggagctggaagtggaaaaacacgtgtgttaacgcatcgtatcgca
tatttaattgaagaaaaagatgtgccaagctataacattttagcgatcacatttacaaat
aaagcagcgaaagaaatgaaagagcgtgtcgacaaactaatcgacgacgacacatctaaa
atgtggatttcaacgttccacgcgatgtgcgttagaattttaagacgagatatcgacaaa
ctcggctacgatagaagtttttcaatcttagacacgacagatcagctcaatgtcgtaaaa
gatgttttaaaatcgatgaatatagaccaaaaacaatatccaccccgccagtttttaaat
gctatttcaaactttaaaaacgcattaattactgaaaaagaagcgaaagaaaacgcatat
gattttagagaaaaactaaatgcggatatatatacgtcataccaagaaattttatatcgt
aacagtgcgctagattttgacgatttaattatgctgacgatacaactgtttcaaaaagat
gaagcaatcttaaattattaccaaacaaaatttcaatatattcatgtcgatgaatatcaa
gatacgaaccatgcacaatatcagctcgtctatatgcttagtcaaaaatatgaaaatatt
tgcgtcgttggggatagcgatcagtcaatttacaaattccgcggtgcagatattatgaat
attttaaacttcgaaaaagactacgataacgtaaagacgattttactcgaagaaaactac
cgctcgcatcagcgtatattagacgcagcgaataacgtcatcgaaaacaatacgagccgc
gtaccgaaaaatttagtgacaagtcgtggtaaaggtgaaaaaattacatcaatcgtctct
caaaacgaacgagaagaaggccagcgtgtcgttaaacagattcaaaaactcaaaaatgaa
ggatacagatttaacgacatggctgtattataccgcgcaaactcacagtcacgtgcaatc
gaagatgcactcgtaaaatcatccctaccatataatatggttggtggtatgaagttctat
caacgtaaagaaattaaagacttaatgagttatatgaaagtcgttttaaatatccacgat
gatatcgcaatggaacgtattattaatacaccaaagcgtggaatcggaccgaagacgatc
gacacgttaaagcaacacgcgaacgcgttaaattcgagcatatacgacgcaattaaagac
gcggatttcatcggtctatcaaagaaaaacgctgaaaacttagcacaattattaagtgta
cttgaaaacttaaaagaaaagtctaagtttatgtcgattacagacttagtcgatgaaata
ctccacgacactggatatttaaatatgcttatccgtgaaaacacacttgaaagtaattca
cgaatagaaaacttagaagagtttaaaacagtaacgaaagaatttgacgaaacacatacg
attggagacgaactgctctttgactttttaagtgatatggcactcgttagtgatcaagat
agtgttgacgacacagatgctgtcacacttatgacaatccacgcctctaaaggactcgag
tttaaagtgattttcatcgtcggtcttgaagaagggctatttccttcatatagatcgatg
gatactgaagaagaactcgaagaagagcgcagacttatgtacgtcgcgattacacgtgcg
atggagcgcttaatcatttcacgtgcgacgtcacgtactatatttggtcgaacaaataac
gcaatggaaagccaattctggtcagaaataccagcagatttagttgaaggtgaatccctc
atttctgtatacgacggacgtagtagtaacagtaagaaacgtccacgtagtaaaagccaa
gtgtttacagataatagtggcgtaacatttaacgtcggcgataaagtaacgcataaaacg
tttggtgacgggatgattacagcaattaacggttcaggtgacagtgaagagctcgatatc
gtattttcaaaagtcggtccgaaacggttacttgcgaaatttgcgccaattgaaaagaaa
gggtga
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