Nosocomiicoccus massiliensis: CJ229_004520
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Entry
CJ229_004520 CDS
T09499
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
nmy
Nosocomiicoccus massiliensis
Brite
KEGG Orthology (KO) [BR:
nmy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
nmy03021
]
CJ229_004520 (sigB)
Transcription machinery [BR:
nmy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CJ229_004520 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r4_2
HNF-1_N
KORA
HTH_16
DUF134
Sigma70_ECF
GerE
IF2_N
NirdL-like_HTH
HTH_37
TnsD
Motif
Other DBs
NCBI-ProteinID:
WOS95373
UniProt:
A0AAF0YGK1
LinkDB
All DBs
Position
complement(846131..846913)
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AA seq
260 aa
AA seq
DB search
MEQSQTRKELSRDEINRLITEYQETGSDEAQTRLVYHYEKLIESLAYRYSKGQSHHEDLV
QVGMIGLLGAIKRFDLSFERKFEAFLVPTVLGEIKRYLRDKTWSVHVPRRIKELGPKIKR
STDELTNELERSPSVKEIAEYIGATEEEVLEAMEMGQSYNALSVDHSIDADNEGSSVTLL
DVMGEEDDNYAQTEERLLIEKLLPILSEREQQIIRYTFLESLSQKETGEKIGLSQMHVSR
LQRAALKKLRDSVKNTDIDI
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atggagcaatcacaaactagaaaagaactttcacgtgatgaaattaatcgcttaattact
gaatatcaagaaactggaagcgatgaagcacaaacgcgtttagtttatcactatgaaaaa
ctcatcgagtcactcgcatatcgatattcaaaagggcaatcacatcacgaagaccttgta
caagtcggtatgattggattgctcggtgcaattaaacgattcgatttatcttttgagcgt
aaatttgaagcatttctagtaccgacagttctcggtgaaatcaaacgttatttaagagat
aaaacgtggagtgttcatgtcccgaggcgtattaaagagcttggtccaaaaatcaaacgt
tctacagatgagttaacgaatgagctagagcgatcaccatctgttaaagaaatcgcagaa
tatatcggtgcaacagaagaagaagtactcgaagcgatggagatgggacaaagctacaat
gcgttaagtgtggatcactcgattgacgcagataacgaaggttcatctgtgacgttactc
gacgtaatgggtgaggaagatgataattatgctcaaaccgaggaacgtttacttatagaa
aagttattaccgattttatctgaaagagaacaacagattatacgatatacatttttagaa
tctttaagtcaaaaagagactggagaaaaaatcggtttaagccaaatgcatgtatcaaga
ttacaacgtgcagcacttaaaaagttgagagattctgttaaaaatacagatatagatatt
taa
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