Neisseria meningitidis NZ-05/33 (serogroup B): NMBNZ0533_1174
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Entry
NMBNZ0533_1174 CDS
T01949
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
nmz
Neisseria meningitidis NZ-05/33 (serogroup B)
Pathway
nmz03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nmz00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NMBNZ0533_1174 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nmz03019
]
NMBNZ0533_1174 (rnr)
03016 Transfer RNA biogenesis [BR:
nmz03016
]
NMBNZ0533_1174 (rnr)
Enzymes [BR:
nmz01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
NMBNZ0533_1174 (rnr)
Messenger RNA biogenesis [BR:
nmz03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
NMBNZ0533_1174 (rnr)
Transfer RNA biogenesis [BR:
nmz03016
]
Prokaryotic type
tRNA degradation factors
NMBNZ0533_1174 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
ADZ03601
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All DBs
Position
1207957..1210332
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AA seq
791 aa
AA seq
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MNKNIKSLNLREKDPFLSREKQRYEHPLPSREWIIELLERKGVPSKIEALVRELSIKEEE
YEFFERRLKAMARDGQVLINRRGAVCAADKLDLVKCRVEAHKDGFGFAVPLTPAKDGDFV
LYERQMRGIMHGDIVTVRPAGMDRRGRREGTVLDIVERAQSKVVGRFYMDRGVAILEPED
KRLNQSIVLEPDGVARFKPESGQVIVGEIEVYPEQNRPAVAKIIEVLGDYADSGMEIEIA
VRKHHLPHQFSEACAKAAKKIPDHVRKSDLKGRVDLRDLPLVTIDGETARDFDDAVFAEK
IGRNYRLVVAIADVSHYVRPDDAIDTDAQERSTSVYFPRRVIPMLPENLSNGICSLNPNV
ERLCMVCDMVITYAGNIKEYRFYPAVMRSHARLTYNQVWKWLSDGIGHPFKAQIDTLYKL
FKILQKKRFERGAVEFDSIETQMLFDDNGKIEKIVPVVRNDAHKLIEECMLAANVCAADF
LLKNKHTALFRNHLGPTPEKLAALREQLGLLGLQLGGGDNPSPKDYAALAGQFKGRPDAE
LLQVMMLRSMQQAVYEPHCDGHFGLAYEAYAHFTSPIRRYPDLTVHRAIKAVLNQQTYTP
KKSWQALGVHTSFCERRADDASRDVENWLKTYYMRDKVGEVFEGKISGMTSFGIFVTLDG
IHIDGLVHISDLGEDYFNFRPEIMAIEGERSGIRFNMGDRVAVRVARADLDDGKIDFVLI
AEGSGRGRKVKSSASAKPAGTAGKGKPKTAAEKKTARGGKVRGRGASAAAESGKKAKKPV
PIKVKKRKGKS
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaatattaaatctttaaatttacgggaaaaagacccgtttttaagtcgtgaa
aaacagcgttatgaacatcctttgcccagtcgggaatggataatcgagctgcttgaacgt
aaaggcgtaccatccaagattgaagctttggtacgcgaattgtcgattaaggaagaagag
tacgaatttttcgaacgtcgtctgaaggcgatggcgcgggacggtcaggttttaatcaac
cgtcggggcgcggtttgcgcggcggacaaattggatttggtcaaatgccgtgtcgaggcg
cacaaagacggcttcggtttcgccgtgccgctcacgcccgccaaagacggtgattttgtt
ttgtacgaacgccagatgcgcggcattatgcacggcgatattgtcactgttcgtcctgcc
ggcatggaccgtaggggccgccgcgaagggacggttctggatattgtcgaacgcgcgcaa
agcaaagttgtcggccgtttctatatggataggggcgtggcgattttggagccggaagac
aagcgtctgaaccaaagcatcgtattggaaccggacggcgtggcgcgtttcaaacctgaa
tccggtcaggtcatcgtcggcgaaattgaggtttatcctgagcaaaaccggccggcagtg
gcaaaaatcatcgaagttttgggcgattatgccgacagcggcatggagattgaaattgcc
gtgcgcaagcatcatttgccgcaccaattcagtgaagcgtgtgccaaagccgcgaaaaaa
attcccgaccatgtacgcaaaagcgatttgaaaggccgcgtcgatttgcgcgatttgcct
ttggtaacgatagacggcgaaacggcgcgcgattttgacgatgccgtgtttgccgaaaaa
atcggacgcaattaccgtctggtcgtggcgattgccgatgtcagccattatgtccgcccc
gatgacgctatcgacacggacgctcaggaacgcagcaccagtgtttacttcccgcgccgc
gtgattcccatgttgccggaaaacctgtccaacggcatctgctcgctcaatcctaatgtc
gagcgtttgtgtatggtgtgcgatatggtcatcacttacgcgggcaatattaaagaatac
cgcttctaccccgccgtgatgcgctctcatgcccgcctgacctacaaccaagtttggaaa
tggctttcagacggcatcgggcatccgttcaaagcacaaatcgacacgctttacaaactc
ttcaaaatccttcagaaaaagcgtttcgaacgcggggcggtggagtttgacagcatcgaa
acccaaatgcttttcgacgacaacggtaaaattgaaaaaatcgtccccgttgtccgcaac
gatgcccacaagctgattgaagaatgtatgttggcggcaaacgtttgcgcagcggatttt
ctgttgaaaaacaagcataccgcattgttccgcaaccatttggggcccacgcccgaaaaa
ctcgccgccttgcgcgagcagctcggtctgttggggcttcaacttggcggcggcgacaac
ccgtcgccgaaagactatgccgcgcttgccggacagttcaaaggcaggccggatgccgaa
ttgctgcaagtcatgatgttgcgctccatgcaacaggcggtttacgaaccgcattgcgac
ggacactttggtcttgcctacgaagcatacgcccacttcacctcgcccatccgccgctat
cccgacctgaccgtacaccgcgccatcaaagccgtgttgaatcagcaaacctacacgcca
aaaaaaagctggcaggctttgggcgtgcatacctcgttctgtgagcgccgtgccgacgac
gccagccgcgacgtggaaaactggctgaaaacctattatatgcgcgataaggtcggcgaa
gtattcgaaggtaaaatctccggcatgaccagttttggtatctttgtaacactggacggc
atccacattgacggcttggtgcatatcagcgatttgggcgaagactatttcaacttccgc
cccgaaatcatggcaatcgaaggcgaacgcagcggcatccgtttcaacatgggggacagg
gttgccgtccgggtcgcccgtgccgatttggatgatggaaaaatcgattttgtcctgatt
gccgaggggagcggcagggggcggaaagttaaatcatccgcgtctgccaaaccggcaggg
acggcggggaaagggaaaccgaaaaccgccgccgagaaaaaaacagcccgaggcggcaaa
gtaaggggaaggggcgcgtctgccgccgcagaatcggggaaaaaggcaaagaaaccggtt
ccgattaaggtaaaaaaacggaaaggcaaatcataa
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