KEGG   Neobacillus niacini: ACN6MT_03445
Entry
ACN6MT_03445      CDS       T11354                                 
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
  KO
K03046  DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]
Organism
nna  Neobacillus niacini
Pathway
nna03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:nna00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    ACN6MT_03445 (rpoC)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:nna03021]
    ACN6MT_03445 (rpoC)
   03400 DNA repair and recombination proteins [BR:nna03400]
    ACN6MT_03445 (rpoC)
Enzymes [BR:nna01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     ACN6MT_03445 (rpoC)
Transcription machinery [BR:nna03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Core subunits
     ACN6MT_03445 (rpoC)
DNA repair and recombination proteins [BR:nna03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase complex (RNAP)
      ACN6MT_03445 (rpoC)
SSDB
Motif
Pfam: RNA_pol_Rpb1_1 RNA_pol_Rpb1_5 RNA_pol_Rpb1_3 RNA_pol_Rpb1_2 RNA_pol_Rpb1_4
Other DBs
NCBI-ProteinID: XQA33635
LinkDB
Position
complement(728338..731937)
AA seq 1199 aa
MLDVNNFEYMKIGLASPDKIRSWSFGEVKKPETINYRTLKPEKDGLFCERIFGPTKDWEC
HCGKYKRVRYKGVVCDRCGVEVTRAKVRRERMGHIELAAPVSHIWYFKGIPSRMGLVLDM
SPRALEEIIYFASYVVTESGDTALDKKQLLSEKEYRAYREKYGNKFQAAMGAEAIKKLLS
DIDLNKEVDALKEELKSAQGQRRTRAIKRLEVLEAFRNSGNEPSWMILDVLPVIPPELRP
MVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDLGAPSIIVQNEKRMLQEAVDALIDNGR
RGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGKRVDYSGRSVIVVGPNLKMYQCGLPKE
MALELFKPFVMKELVEKGLAHNIKSAKRKIERVSPEVWDVLEDVIREHPVLLNRAPTLHR
LGIQAFEPTLVEGRAIRLHPLVCTAYNADFDGDQMAVHVPLSSEAQAEARLLMLAAQNIL
NPKDGKPVVTPSQDMVLGNYYLTLEREDAVGEGMIFKDTNEALVAYQNGYVHLHTRVAVH
AGSLGNETLTEEQNNKLLITTVGKLIFNEILPKSFPYINEPTRQNLEVETPAKYFVEKGE
DVPARIKEMPIVDPFKKKILGNIIAEVFKRFKITETSKMLDRMKDLGFKYSTKAGITVGV
ADIVVLPEKQEILHEAQSKVDNVMKQFRRGLITEDERYDRVIAIWSAAKDNIQGKLMKSL
NKTNPIFMMSDSGARGNASNFTQLAGMRGLMANPAGRIIELPIKSSFREGLTVLEYFIST
HGARKGLADTALKTADSGYLTRRLVDVAQDVIVREDDCGTDRGLLIRSLKDGTEVIEGLD
ERLIGRYARNPIRHPETKEVLVPENGLITEDLAETIVGAGIEEVKIRSAFTCNTRHGVCK
KCYGRNLATGQEVEVGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIF
EARNPKGQAVISEIDGVVVGINEGRDRQHEIIVQGEIESRTYNAPYTARLKVAVNDQIAR
GQELTEGSIDPKELIKVKDVTAVQEYLLREVQKVYRMQGVEIGDKHVEVMVRQMMRKVRV
SDAGETDVLPGTLLDIHQFTDANEKALLAGKLPATGRPVLLGITKASLETDSFLSAASFQ
ETTRVLTDAAIKGKRDELLGLKENVIIGKLVPAGTGMQRYRKAEPVLRDTTSEETVAID
NT seq 3600 nt   +upstreamnt  +downstreamnt
ttgctggatgttaataattttgagtatatgaagattggtctggcatcaccggataaaatc
cgttcttggtcttttggagaagtaaagaagccagaaacgattaactatcgtacattgaaa
cctgaaaaagatggtttattctgtgaaagaatttttggtcctacaaaggactgggaatgt
cactgcggtaaatataagcgtgtccgttacaaaggtgttgtatgtgatcgatgcggtgtt
gaagtaacacgtgctaaagttcgtcgtgaacgtatggggcatattgagctagctgctcct
gtttctcatatttggtattttaaaggcatccctagccgtatgggactagtattagatatg
tctcctagggcattagaagaaattatttactttgcttcttatgttgtaacagaatcaggc
gatactgctcttgataagaaacaacttttatcagaaaaggaatatcgtgcataccgtgaa
aagtacggcaataaattccaagcagccatgggtgcggaagcgattaaaaaacttctttct
gatatcgacttaaataaagaggttgacgcattaaaagaagagttaaaatcagctcaaggc
cagcgtcgtactcgtgcgatcaaacgccttgaagtgttggaagcattccgtaactctgga
aatgagccatcatggatgattcttgatgttcttcctgttattcctccggagcttcgtcca
atggtacagttggatggaggaagattcgcgacatccgatttaaacgatttataccgtcga
gtaattaaccgtaataatcgtctaaaacgtttgttggatcttggtgctccaagtattatc
gttcaaaacgaaaagcgtatgcttcaagaagcagtagacgcattaattgataatggccgc
cgtggtcgtccggtaacgggtccaggtaaccgtccattaaagtcactttcccatatgtta
aaagggaaacaagggcgtttccgtcaaaacttacttggtaaacgtgttgactattctggt
cgttccgttatcgttgttggtcctaacttaaagatgtaccaatgtggtcttccgaaagaa
atggctcttgaattatttaagccatttgttatgaaggaacttgtagaaaaaggcttagcc
cataatattaaatctgcaaaacgtaagattgaaagagtatctcctgaagtatgggatgta
cttgaagatgttattcgtgagcacccagttttattaaaccgtgccccaacacttcataga
cttggaattcaggcatttgaacctacacttgttgaaggaagagcgattcgccttcaccct
cttgtatgtactgcgtacaatgcggactttgacggtgaccaaatggctgttcacgttcca
ctttcatctgaagcacaagcagaagctagactattaatgcttgcagctcaaaatatcttg
aaccctaaagatggtaagccagttgtaacaccttctcaggatatggtactaggtaactat
tacttaactcttgaaagagaagacgctgtcggagagggtatgatctttaaagatacgaac
gaggcattagttgcttatcaaaatggctatgttcatctgcacactcgtgttgcagtccat
gctggttcgctaggaaatgaaaccttaacagaagaacagaataataagctgcttattacg
actgtaggtaaacttatttttaatgaaattcttccaaagtcattcccttatatcaatgaa
ccaacgagacaaaacttagaggtggaaacacctgcaaagtactttgttgaaaaaggtgaa
gatgttccagctagaattaaagaaatgccaatagtagacccgttcaaaaagaaaatcctt
ggaaatatcattgcagaagtatttaaacgattcaaaattactgaaacgtctaaaatgcta
gaccgtatgaaggacttaggatttaaatattctacaaaagcaggtattactgtcggtgtc
gctgatatcgtggtattaccggaaaaacaagaaattcttcatgaggcacaaagcaaggtt
gataacgttatgaagcagttccgtcgtggattaattacggaagacgaacgttatgatcgt
gttattgctatatggagtgcggcgaaggataacattcaaggaaaactgatgaaatcgtta
aataaaacgaatccaattttcatgatgagtgattccggtgcccgtggtaacgcatctaac
tttactcagcttgctggtatgcgtggtttgatggccaacccggctggacgtatcatcgaa
ttaccaattaaatcaagtttccgtgaaggtctgacagtattagagtactttatctctaca
cacggtgcgcgtaaaggtcttgctgatacagcattaaaaactgctgactctggttactta
acacgtcgtcttgttgacgttgcgcaagatgtcattgtccgtgaagatgattgtggtact
gatcgtggtttgttaattcgttccttaaaagatggtacggaggttatcgaaggtttagat
gaacgtttaattggccgttatgctcgaaacccaattagacatccagaaacaaaagaagtg
ttagttcctgaaaatggacttatcaccgaggatctagcagaaacaattgttggtgctgga
atcgaagaagtgaagattcgctctgcgtttacatgtaatacccgtcatggtgtatgtaag
aagtgttatggacgtaacttggcaacaggtcaagaagttgaagttggggaagcagttggt
attattgcagcccaatcaattggtgaacctggtacacagttaaccatgcgtacattccat
acaggtggtgtagcaggagacgatattacccaaggtttaccgcgtattcaagaaattttt
gaagctcgtaatcctaaaggtcaagcggttatttctgaaattgacggtgtggttgttggt
attaatgaaggacgtgatcgtcagcatgagattattgttcaaggtgaaattgaatcacgt
acgtataatgctccatatacagcacgtctaaaagttgcagttaatgatcaaattgctcgt
ggtcaggaattaacagaaggttcaattgaccctaaagagttaattaaagtaaaagatgtt
actgctgttcaagaatacttactccgcgaagttcaaaaggtataccgtatgcagggtgtt
gaaattggcgataagcacgtagaagtaatggttcgtcagatgatgcgtaaggttcgcgta
agtgatgcgggtgaaacagatgtacttcctggtacactattagatattcaccaattcaca
gatgcaaacgaaaaagcattgttagcaggtaagttaccagctactggacgtcctgtatta
ctgggaattacgaaagcgtcacttgaaactgactcattcctgtctgctgcatcattccaa
gaaactacaagagttcttacagatgctgcaattaaaggtaaacgtgatgaattactcggc
ttaaaagaaaatgttatcatcggtaagctagttcctgcgggaacaggtatgcagcgttat
cgcaaagcagaacctgttttaagggatacaacctccgaagaaacagttgcaattgattaa

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