Neobacillus niacini: ACN6MT_14885
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Entry
ACN6MT_14885 CDS
T11354
Name
(GenBank) DNA ligase D
KO
K01971
bifunctional non-homologous end joining protein LigD [EC:
6.5.1.1
]
Organism
nna Neobacillus niacini
Pathway
nna03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
nna00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
ACN6MT_14885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
nna03400
]
ACN6MT_14885
Enzymes [BR:
nna01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
ACN6MT_14885
DNA repair and recombination proteins [BR:
nna03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
ACN6MT_14885
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NCBI-ProteinID:
XQA30359
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Position
complement(3030144..3031982)
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AA seq
612 aa
AA seq
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MKPMLPTLTFDLSVQPDWLYEVKYDGFRAILNWDKNGITLTSRNDKPLLPQFPEIKEFLE
PLEEFFQPLLPLRLDGELVLLENPYKANFSAIQVRGRLKASKKIVEQAEKVPCRLMVFDI
LVLAGKPLHSKKFEERKERLIELFKQLDLPLEADPYNHNLLQLVKAHKDFSKLWENVVLH
DGEGIIAKQKNSQWEEGKRSLHWLKYKNWKYVSCFITAFEKTNGYFYVGVYKEGSIQGIG
QVLFGFKPDEKQALQSTIKQNMVSEDTQFIYVEPAICLEVKYLELFENQLREPHFHRFRF
DLKPNECTYEQFIFKQKNLPEDLDITHPDKPLWKNHDIQKADFILYLREVSPYMLPFLED
RVLTVIRYPHGMFGEPFYQKNCPDYAPDFVHTHISEGIDYIVCNNLKTLIWLGNQLAIEY
HIPFQKIHSKGASEIVFDLDPPSKEEFHLAVKAALFIKEVLDQLNLIGFIKTSGNKGLQI
YLPLPEDVFSFEDTRLFTSFIADYLISKDPDSFTTERMKKNRGNRLYVDYVQHSEGKTIV
APYSMRGNEHAGVATPLYWDEVDDTLNPVDFNMENALQRIKKQGDPFKNYFQTKTIQPFG
PVLEVLKANKVT
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccgatgctgccaacactaacattcgacctaagcgttcaacctgattggctgtac
gaggttaagtatgatggatttcgagcgattttgaattgggataaaaatgggattacctta
accagtaggaatgacaagcccttgctgccacaattcccagagataaaggaatttcttgag
ccgctagaagaattctttcaacctcttctgccgcttcgacttgatggagagcttgttcta
cttgaaaatccatataaggccaatttctctgcgatccaagtccgtggaagattaaaggct
tcaaagaaaattgttgaacaagcagaaaaggttccttgtcgtttaatggtctttgatatc
ctagtattagctggcaaacctcttcattcaaaaaaatttgaagaacgaaaggagagacta
atcgagctttttaaacagctcgatctcccactagaagcagacccctataatcataactta
ctgcagctagttaaagcccataaggacttttcaaaattatgggaaaacgttgttctccat
gatggtgaagggattattgcaaaacaaaaaaacagtcaatgggaagaaggaaagagatcc
ttacattggttaaaatataaaaactggaaatatgtatcctgctttattacagcatttgaa
aagacaaatggttacttttatgttggagtctacaaggaaggaagtattcagggaattggt
caagtactatttggctttaaaccagacgagaagcaagctcttcaaagtacgattaaacag
aatatggtgagtgaagacacccagtttatctatgtcgagcctgctatttgcttagaggta
aaatacttagagcttttcgaaaatcagctgcgtgaacctcattttcatcgcttccgtttt
gatttaaagcctaatgaatgtacatatgaacaatttatctttaagcaaaaaaatttaccg
gaagatttggatattacccaccctgataagcctctttggaaaaaccatgacattcaaaag
gcagatttcatactgtatctaagggaagtatcaccatatatgctgccttttttagaagat
cgagtcctaacagtgattcgctatccgcacggaatgttcggtgaacccttttatcaaaaa
aattgtccagactatgcacccgattttgttcatacacatatatcagaaggcattgattat
atcgtttgtaacaatctaaaaacactcatctggctcggtaatcagcttgcgattgaatac
catataccatttcaaaaaattcacagtaagggagcgagtgaaattgtctttgatttagat
cctccttcaaaggaagaatttcacttagcggtaaaagctgcattgttcattaaagaggtt
cttgatcaattaaatctaattggatttataaaaacatctggaaataaaggattacaaatt
tatctgcctttgcctgaggacgtattttcctttgaagatacacgtttattcacaagtttt
atagcggactatttgatttcgaaggatccagattcgtttacaacggaacgaatgaaaaaa
aatcgtggaaatagactttacgttgactatgtccagcatagtgaaggaaaaacgattgta
gcaccctattccatgagagggaatgagcatgccggtgtagccacaccactatattgggac
gaagtggatgataccctaaatcccgtggactttaacatggaaaatgcattacaacgaatt
aaaaaacaaggtgatccttttaagaattattttcaaacaaaaacgattcagccttttgga
cccgtgctcgaagtgttgaaagcaaacaaggtcacatag
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