Neobacillus niacini: ACN6MT_17610
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Entry
ACN6MT_17610 CDS
T11354
Name
(GenBank) ribonuclease J
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
nna Neobacillus niacini
Pathway
nna03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
nna00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACN6MT_17610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
nna03019
]
ACN6MT_17610
Messenger RNA biogenesis [BR:
nna03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACN6MT_17610
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
Lactamase_B_2
RMMBL
Anti-Pycsar_Apyc1
Ribosomal_S18
Lactamase_B_6
ODP
NeuB
Motif
Other DBs
NCBI-ProteinID:
XQA30846
LinkDB
All DBs
Position
complement(3565594..3567264)
Genome browser
AA seq
556 aa
AA seq
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MSKKSVSIFALGGINEIGKNMYVIQYEDDIIIIDCGGKFPDESLMGIDLIIPDMTYLEEH
QDKIRAMIVTHGHEDHIGGIPFFLKRFNQVPIYATRFTLGLIELKLEEHRLLRDTELVTI
HSESTLEFGEIGVSFFKVSHSIPDCLGIVFHTPEGNIVHTGDFKFDLTPSNDQYSDIHKM
AEIGQKGVIALISESTNAERKGLSPSEQMVGDHLLEAFIKADGKIILSTFASNVNRVQQV
VEAAIKTNRKLALLGRSMVNVVDVAMERGYLDMPEGMLINANEIEQFPPDKVAILCTGSQ
GEPNAALARLSTGNYRDATIYPGDTVVLAASPIPGNEKGVSKIIDNLFQLGAKVIYGSGS
STGMHVSGHGYQEDLKLMLTLMKPTYFIPIHGEYRMLHHHRQLAESVGVEKGNTFIIKNG
DVIDIENSVARQTRNIPAGDTYVDGISVGDVGEVVLRDRRQLSEDGMLVIVLTISKSDRK
IIQGPDTITRGFVYVKESEDLIREINRLVKKVILELEADNIRQWNVMKQNIKKSVGQYLF
KHTKRKPMILPIILEI
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaaaatctgtatccatttttgccttgggaggcattaatgaaatcgggaaaaac
atgtacgtcattcagtatgaagacgatatcatcatcatcgactgcggcggtaaatttcct
gatgagagtctgatggggattgacctaataatccctgatatgacgtatctagaggaacat
caggacaaaatacgtgcgatgattgtgacacacggccacgaagatcatattggcggtatc
cctttctttttgaagagatttaatcaagttcctatatatgcaactcgttttacattgggg
ttaatcgaattaaagttggaagagcaccgcctgcttcgcgatacggaacttgttaccatt
cattccgaatccacactagaattcggagaaattggtgtttctttctttaaggtgagtcat
agtatccctgactgcttaggtattgtcttccacacccctgaaggaaatatcgttcatacc
ggtgactttaagtttgacttaacaccatcaaatgaccaatatagtgatattcataaaatg
gctgagattggccaaaaaggtgtcatagccttaatttcggaaagcaccaatgccgaacgc
aaggggttatcaccgtctgaacaaatggttggtgaccatttattagaggcttttataaag
gcggatggaaaaataattctttctacttttgcatcaaacgtgaaccgtgttcaacaggtg
gttgaggcagcgataaaaacaaatcgtaagctggcgttacttggacgaagtatggttaac
gtggtggatgttgcaatggaacgcggatacttggatatgccagaagggatgctcatcaat
gcgaatgagattgaacaattccctcctgataaggttgcgattctctgtacaggaagtcaa
ggtgaacctaatgcagctttagcacggttatcaacaggaaattatcgtgatgcaaccata
tatcctggagataccgttgttttagcagcatcacctatcccaggaaatgaaaaaggggtt
tctaagatcattgataacctatttcaactaggagctaaggtcatttatggctcaggcagc
tcaaccggtatgcatgtttccggtcatggctaccaagaagacttgaaacttatgctcacg
ctgatgaagccaacctattttatcccgattcatggtgaatatcgaatgctccatcatcac
aggcagttagctgaatcggtcggtgttgaaaaaggaaatacatttattataaaaaatggt
gatgttattgatattgaaaattcagtggctcggcagacacgaaatatccctgcaggagac
acgtatgtagatggcattagtgttggcgatgtgggggaggttgttttacgagaccgcaga
cagctttcagaagatggaatgcttgttattgttttaacgatcagtaaatccgatcgaaaa
attatccaaggtcctgacacgattactcgtggatttgtttatgtaaaggaatcagaggat
ttaattagagaaattaatcgtcttgttaagaaagtgattcttgaattagaagcagataat
attcgccaatggaacgtaatgaagcaaaatattaaaaaatctgtcggccagtatttgttt
aagcatacgaagagaaaaccgatgattctaccaattatcctcgaaatataa
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